RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 GINS3Q9BRX5 216 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
SPG11-214ENST00000558989 DUXBA0A1W2PPF3 345 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 RBMY1BA6NDE4 496 aaKnown RBP7.2□□□□□ -1.26
SPG11-214ENST00000558989 RBMY1EA6NEQ0 496 aaKnown RBP7.2□□□□□ -1.26
SPG11-214ENST00000558989 K7EMT4 169 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 CCSO14618 274 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 RBMY1DP0C7P1 496 aaKnown RBP7.2□□□□□ -1.26
SPG11-214ENST00000558989 OR10J1P30954 320 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 S100A12P80511 92 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 MRPL23Q16540 153 aaKnown RBP7.2□□□□□ -1.26
SPG11-214ENST00000558989 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 PVRIGQ6DKI7 326 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 LRTM2Q8N967 370 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 COQ8AQ8NI60 647 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 SEC22CQ9BRL7 303 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 TMED3Q9Y3Q3 217 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 STAB2Q8WWQ8 2551 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 PITX3O75364 302 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 NDUFB4O95168 129 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 IGKV1-17P01599 117 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 TCRBP04435 133 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 SPANXN5Q5MJ07 72 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 TCF24Q7RTU0 167 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 RNASEH2CQ8TDP1 164 aaKnown RBP7.2□□□□□ -1.26
SPG11-214ENST00000558989 GRAMD2BQ96HH9 432 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 OR10C1Q96KK4 312 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 GSKIPQ9P0R6 139 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 U3KQ87 197 aa7.2□□□□□ -1.26
SPG11-214ENST00000558989 NBEAL2Q6ZNJ1 2754 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 SYNGR2O43760 224 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 IFNA21P01568 189 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 IGLC1P0CG04 106 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 SLC25A4P12235 298 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 NPPCP23582 126 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 NHLH2Q02577 135 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 URGCP-MRPS24S4R325 110 aa7.19□□□□□ -1.26
SPG11-214ENST00000558989 TRAV30A0A087WSZ9 112 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 ZFP92A6NM28 416 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
SPG11-214ENST00000558989 SSSCA1O60232 199 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 MED6O75586 246 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 IL4P05112 153 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
SPG11-214ENST00000558989 OR2F1Q13607 317 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 UQCC3Q6UW78 93 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 GSG1LQ6UXU4 331 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 OR1S2Q8NGQ3 325 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 Q8WTZ3 238 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 S100ZQ8WXG8 99 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 SLC35E1Q96K37 410 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 METTL26Q96S19 204 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 TM2D3Q9BRN9 247 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 CCDC32Q9BV29 185 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 PBDC1Q9BVG4 233 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 CACFD1Q9UGQ2 172 aa7.18□□□□□ -1.26
SPG11-214ENST00000558989 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 OR4C46A6NHA9 309 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 ZNF90Q03938 601 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 ZNF846Q147U1 533 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 IAH1Q2TAA2 248 aaPredicted RBP7.17□□□□□ -1.26
SPG11-214ENST00000558989 ODF3L2Q3SX64 289 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 OR8G2PQ6IF36 304 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 SPATA25Q9BR10 227 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 PTTG2Q9NZH5 202 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 SIVA1O15304 175 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 RD3LP0DJH9 198 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 SLC25A6P12236 298 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 NKX2-1P43699 371 aaPredicted RBP7.17□□□□□ -1.26
SPG11-214ENST00000558989 LEMD1Q68G75 181 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 OR51G1Q8NGK1 321 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 PSENENQ9NZ42 101 aa7.17□□□□□ -1.26
SPG11-214ENST00000558989 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
SPG11-214ENST00000558989 FAM90A26D6RGX4 464 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 CCNKO75909 580 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 PSG1P11464 419 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 P2RY1P47900 373 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 LYZP61626 148 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 RRAS2P62070 204 aaPredicted RBP7.16□□□□□ -1.26
SPG11-214ENST00000558989 FAM24BQ8N5W8 94 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 NARS2Q96I59 477 aaKnown RBP7.16□□□□□ -1.26
SPG11-214ENST00000558989 CIB3Q96Q77 187 aaPredicted RBP7.16□□□□□ -1.26
SPG11-214ENST00000558989 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 VSIRQ9H7M9 311 aa7.16□□□□□ -1.26
SPG11-214ENST00000558989 LSM5Q9Y4Y9 91 aaKnown RBP7.16□□□□□ -1.26
SPG11-214ENST00000558989 A0A1W2PS18 150 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 UPK1BO75841 260 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 TOMM40O96008 361 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 YPEL3P61236 119 aaPredicted RBP7.15□□□□□ -1.26
SPG11-214ENST00000558989 PAFAH1B2P68402 229 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 IFITM3Q01628 133 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 AKR1C1Q04828 323 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 ZFAND6Q6FIF0 208 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
SPG11-214ENST00000558989 GGTLC1Q9BX51 225 aa7.15□□□□□ -1.26
SPG11-214ENST00000558989 RCL1Q9Y2P8 373 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms