RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
VPS18-202ENST00000558474 MEOX2P50222 304 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 SLURP1P55000 103 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 MORN5Q5VZ52 161 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 IL34Q6ZMJ4 242 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 PAXXQ9BUH6 204 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 SCRT1Q9BWW7 348 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 SIGLEC8Q9NYZ4 499 aa11.34□□□□□ -0.59
VPS18-202ENST00000558474 IGHV3OR16-8A0A075B7F1 116 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 TRAV5A0A0B4J249 113 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 M0QZ24 198 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 IFNA1P01562 189 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 GP9P14770 177 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 GCHFRP30047 84 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 GUK1Q16774 197 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 TM4SF20Q53R12 229 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 OR8I2Q8N0Y5 310 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 DLX4Q92988 240 aaPredicted RBP11.33□□□□□ -0.6
VPS18-202ENST00000558474 HRH4Q9H3N8 390 aa11.33□□□□□ -0.6
VPS18-202ENST00000558474 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 HELTA6NFD8 242 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 OVOL1O14753 267 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 CHEK1O14757 476 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 MRPS12O15235 138 aaKnown RBP11.32□□□□□ -0.6
VPS18-202ENST00000558474 HMGB3O15347 200 aaKnown RBP11.32□□□□□ -0.6
VPS18-202ENST00000558474 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
VPS18-202ENST00000558474 CBLN1P23435 193 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 GALR1P47211 349 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 PDE6HQ13956 83 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 LURAP1LQ8IV03 231 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 C3orf56Q8N813 242 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 TXNDC17Q9BRA2 123 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 RHPN1-AS1Q9BWJ2 59 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 MANBALQ9NQG1 85 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
VPS18-202ENST00000558474 A0A087X0K7 114 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 ZNF253O75346 499 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 NDUFS6O75380 124 aaKnown RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 APOHP02749 345 aaPredicted RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 FGF8P55075 233 aaPredicted RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 FXYD5Q96DB9 178 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
VPS18-202ENST00000558474 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
VPS18-202ENST00000558474 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 PF4P02776 101 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 FOLR2P14207 255 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 HIST2H2BDQ6DRA6 164 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 LYPD1Q8N2G4 141 aa11.3□□□□□ -0.6
VPS18-202ENST00000558474 CSN3P07498 182 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 PYYP10082 97 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 ATF4P18848 351 aaPredicted RBP11.29□□□□□ -0.6
VPS18-202ENST00000558474 CCL20P78556 96 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
VPS18-202ENST00000558474 TRBV19A0A075B6N1 114 aa11.28□□□□□ -0.6
VPS18-202ENST00000558474 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
VPS18-202ENST00000558474 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
VPS18-202ENST00000558474 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
VPS18-202ENST00000558474 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
VPS18-202ENST00000558474 IGHV3-49A0A0A0MS15 119 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 A0A1B0GV50 99 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
VPS18-202ENST00000558474 OR10J4P0C629 311 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 BCL2P10415 239 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 PSG9Q00887 426 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 ZNF506Q5JVG8 444 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 UQCC3Q6UW78 93 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 SLC50A1Q9BRV3 221 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 VAX2Q9UIW0 290 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
VPS18-202ENST00000558474 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 IGHV3-66A0A0C4DH42 116 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 FAM74A7A6NL05 159 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms