RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 INSP01308 110 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 IGKV1-5P01602 117 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 PRM2P04554 102 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 GCSHP23434 173 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 HLA-DMAP28067 261 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 SDC2P34741 201 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 PRSS3P35030 304 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 MEOX2P50222 304 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 ATP5IP56385 69 aaPredicted RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 LINC00315P59091 139 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 SPCS3P61009 180 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 SUPT4H1P63272 117 aaKnown RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 SMCO1Q147U7 214 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 BSXQ3C1V8 233 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 OR8G2PQ6IF36 304 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 NFE4Q86UQ8 179 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 LYSMD2Q8IV50 215 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 OR8I2Q8N0Y5 310 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 OR10J6PQ8NGY7 276 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 OR52E5Q8NH55 327 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 NPIPB3Q92617 1050 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 FCGR1BQ92637 280 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 SLC25A38Q96DW6 304 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 RNF125Q96EQ8 232 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 C16orf92Q96LL3 132 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 UHRF2Q96PU4 802 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 LINC01587Q99440 93 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 PBDC1Q9BVG4 233 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 FXYD6Q9H0Q3 95 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 HEYLQ9NQ87 328 aaPredicted RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 MRPS16Q9Y3D3 137 aaKnown RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 TIMM8BQ9Y5J9 83 aaPredicted RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TRAV26-1A0A087WT03 109 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 A0A0J9YY99 117 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 SMIM31A0A1B0GVY4 71 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 ZNF98A6NK75 572 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 A8MTW9 85 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 SNRPGP15A8MWD9 76 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 KRTAP29-1A8MX34 341 aaPredicted RBP3.57□□□□□ -1.84
SPG11-208ENST00000558155 ANKRD65E5RJM6 399 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 SOCS3O14543 225 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 RGS13O14921 159 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 SIVA1O15304 175 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 FABP1P07148 127 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 P0C879 139 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 PGAM2P15259 253 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 HTN1P15515 57 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 AZU1P20160 251 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 HRH1P35367 487 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 FUSP35637 526 aaKnown RBP eCLIP3.57□□□□□ -1.84
SPG11-208ENST00000558155 GALR1P47211 349 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 CAMLGP49069 296 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TAS2R60P59551 318 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 KRTAP10-1P60331 282 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 MXD1Q05195 221 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 KLF9Q13886 244 aaPredicted RBP3.57□□□□□ -1.84
SPG11-208ENST00000558155 SPINK13Q1W4C9 94 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TRIM16LQ309B1 348 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TMEM69Q5SWH9 247 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 AMTNQ6UX39 209 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 Q6ZNX1 250 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 ZNF493Q6ZR52 646 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TMEM144Q7Z5S9 345 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 TMEM256Q8N2U0 113 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 C16orf74Q96GX8 76 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 ZNF486Q96H40 463 aaPredicted RBP3.57□□□□□ -1.84
SPG11-208ENST00000558155 ACY3Q96HD9 319 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 CACFD1Q9UGQ2 172 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 ANAPC10Q9UM13 185 aa3.57□□□□□ -1.84
SPG11-208ENST00000558155 APOBP04114 4563 aaKnown RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 TRAV9-2A0A087WT02 112 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 A0A087WTM6 91 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 C3orf85A0A1B0GTC6 90 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 PLAC8L1A1L4L8 177 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 ZFP92A6NM28 416 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 CEBPZOSA8MTT3 80 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 GABARAPH6UMI1 98 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 M0R2Z0 102 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 CRXO43186 299 aaPredicted RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 CCNKO75909 580 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 NXPH3O95157 252 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 GABARAPO95166 117 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 MBP02144 154 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 CLEC2LP0C7M8 214 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 ZNF182P17025 639 aaPredicted RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 UCP1P25874 307 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 S100A7P31151 101 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 RCVRNP35243 200 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 PIGPP57054 158 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 RND3P61587 244 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 RHOBP62745 196 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 GAMTQ14353 236 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 LBHQ53QV2 105 aaPredicted RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 SMIM15Q7Z3B0 74 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 FAM219AQ8IW50 185 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms