RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TSC22D3Q99576 134 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 NRIP2Q9BQI9 281 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 MROQ9BYG7 248 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 PBOV1Q9GZY1 135 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 TXNL4BQ9NX01 149 aaKnown RBP3.7□□□□□ -1.82
RTF1-204ENST00000558117 NDUFB11Q9NX14 153 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 OR52A1Q9UKL2 312 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 PRELID1Q9Y255 219 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 TMEM14AQ9Y6G1 99 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 TRAV41A0A0B4J266 112 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 FAM240AA0A1B0GVK7 77 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 TRDV1A0A1B0GX56 115 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 OR4C45A6NMZ5 311 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 HPGDSO60760 199 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 SULT1C4O75897 302 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 IFNA5P01569 189 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 EIF4EP06730 217 aaKnown RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 CD3GP09693 182 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 NKX2-5P52952 324 aaPredicted RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 FGF8P55075 233 aaPredicted RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 TAS2R43P59537 309 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 RPS11P62280 158 aaKnown RBP eCLIP3.69□□□□□ -1.82
RTF1-204ENST00000558117 LSM6P62312 80 aaKnown RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 PRR3P79522 188 aaKnown RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 DIAPH2-AS1Q14236 149 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 TMEM252Q8N6L7 170 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 Q8NAQ8 132 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 OR5D18Q8NGL1 313 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 ZNRF2Q8NHG8 242 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 ZFAND1Q8TCF1 268 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 SMIM19Q96E16 107 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 C16orf74Q96GX8 76 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 PGLYRP3Q96LB9 341 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 FAM19A4Q96LR4 140 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 FGF23Q9GZV9 251 aaPredicted RBP3.69□□□□□ -1.82
RTF1-204ENST00000558117 ARV1Q9H2C2 271 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 Q9H3A6 140 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 ZNF286AQ9HBT8 521 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 HRASLSQ9HDD0 168 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 FAM206AQ9NX38 181 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 R4GMQ9 66 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 DSCAML1Q8TD84 2053 aa3.69□□□□□ -1.82
RTF1-204ENST00000558117 LOC107986453A0A1B0GWG9 222 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 ZNF878C9JN71 531 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 J3QRK9 145 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 SLC22A1O15245 554 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 IGHV3-23P01764 117 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 MAS1P04201 325 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 CEBPGP53567 150 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 CLDN12P56749 244 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 AP3S2P59780 193 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 MEF2CQ06413 473 aaPredicted RBP3.68□□□□□ -1.82
RTF1-204ENST00000558117 ZNF266Q14584 549 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 C12orf74Q32Q52 190 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 CCDC58Q4VC31 144 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 HSD17B12Q53GQ0 312 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 CLVS2Q5SYC1 327 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 GLYATL3Q5SZD4 288 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 HES5Q5TA89 166 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 CD200R1LQ6Q8B3 271 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 TEX43Q6ZNM6 134 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 C14orf178Q8N769 122 aaPredicted RBP3.68□□□□□ -1.82
RTF1-204ENST00000558117 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 OR8B12Q8NGG6 310 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 OR4A5Q8NH83 315 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 MCFD2Q8NI22 146 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 SPTSSAQ969W0 71 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 FAM3DQ96BQ1 224 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 DERL3Q96Q80 235 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 C6orf62Q9GZU0 229 aaPredicted RBP3.68□□□□□ -1.82
RTF1-204ENST00000558117 GPR84Q9NQS5 396 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 TAS2R4Q9NYW5 299 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 COMMD3Q9UBI1 195 aa3.68□□□□□ -1.82
RTF1-204ENST00000558117 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
RTF1-204ENST00000558117 TMEM212A6NML5 194 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 F5H768 121 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 M0R135 149 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 SLC31A2O15432 143 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 RGS5O15539 181 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 RAB3DO95716 219 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 TTRP02766 147 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 UCHL1P09936 223 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 RAB3BP20337 219 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 MYL9P24844 172 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 EDDM3BP56851 147 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 TAS2R19P59542 299 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 GRB2P62993 217 aaKnown RBP3.67□□□□□ -1.82
RTF1-204ENST00000558117 Q499Y3 187 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 YIF1BQ5BJH7 314 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 MOB1BQ7L9L4 216 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 SNX29P2Q8IUI4 249 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 GAPTQ8N292 157 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 OR51A2Q8NGJ7 313 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 OR5H6Q8NGV6 325 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 OR2G3Q8NGZ4 309 aa3.67□□□□□ -1.82
RTF1-204ENST00000558117 PTH2Q96A98 100 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms