RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HELTA6NFD8 242 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 M0QZK8 103 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 TGOLN2O43493 480 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 OR7C2O60412 319 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 EIF3GO75821 320 aaKnown RBP eCLIP3.48□□□□□ -1.85
SRP54-212ENST00000556992 IGHV3-48P01763 117 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 S100A9P06702 114 aaKnown RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 IGLC1P0CG04 106 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 RNF224P0DH78 156 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 APELAP0DMC3 54 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 FOLR2P14207 255 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 CD99P14209 185 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 ORM2P19652 201 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 RAB5AP20339 215 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 GATA2P23769 480 aaPredicted RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 S100PP25815 95 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 AKR1C3P42330 323 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 TIRAPP58753 221 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 UBE2G2P60604 165 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 YPEL3P61236 119 aaPredicted RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 CFHR3Q02985 330 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 KLK9Q2XQG4 91 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 SPATA31B1PQ5VZV4 182 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 HIST2H2BCQ6DN03 193 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 PATE2Q6UY27 113 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 LINC00305Q7Z4B0 112 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 LRRC75A-AS1Q8N1F1 130 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 FAM24BQ8N5W8 94 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 Q8N9W7 124 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 OR1B1Q8NGR6 318 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 MPLKIPQ8TAP9 179 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 VN1R17PQ8TDU5 208 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 C17orf50Q8WW18 174 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 BTF3L4Q96K17 158 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 RBM14Q96PK6 669 aaKnown RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 OR5B12Q96R08 314 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 PAXXQ9BUH6 204 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 OR51M1Q9H341 326 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 HIF1ANQ9NWT6 349 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 MSRB1Q9NZV6 116 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 KLK9Q9UKQ9 250 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 HIGD1AQ9Y241 93 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 YTHDF2Q9Y5A9 579 aaKnown RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 LY96Q9Y6Y9 160 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 ZNF469Q96JG9 3925 aaPredicted RBP3.48□□□□□ -1.85
SRP54-212ENST00000556992 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
SRP54-212ENST00000556992 ARID1AO14497 2285 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 ANK2Q01484 3957 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 PCNX1Q96RV3 2341 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 IGHV7-81A0A0B4J1V7 117 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 TRAV5A0A0B4J249 113 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 C1orf196B1AJZ1 125 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 H7BYZ3 331 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 K7EIM0 57 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 GNG7O60262 68 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 CRYBA1P05813 215 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 NBEAP1P0C6P0 100 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 NPPCP23582 126 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 FCGR2BP31994 310 aaPredicted RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 SRP14P37108 136 aaKnown RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 ATP5G3P48201 142 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 TAS2R60P59551 318 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 RAB5BP61020 215 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 RPL23P62829 140 aaKnown RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 UBE2L3P68036 154 aaKnown RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 FLI1Q01543 452 aaPredicted RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 LOXL1Q08397 574 aaPredicted RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 ADIRFQ15847 76 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 DEFB113Q30KQ7 82 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 TIGITQ495A1 244 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 KCNIP4Q6PIL6 250 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 UNQ5815/PRO19632Q6UWF5 114 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 PRSS57Q6UWY2 283 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 C16orf82Q7Z2V1 217 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 NECAP1Q8NC96 275 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 OR5T1Q8NG75 326 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 OR5AU1Q8NGC0 362 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 SGMS2Q8NHU3 365 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 FAM110DQ8TAY7 271 aaPredicted RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 PIFOQ8TCI5 191 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 HIST1H2BAQ96A08 127 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 C11orf52Q96A22 123 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 FAM167A-AS1Q96KT0 104 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 IMMP2LQ96T52 175 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 ATP6V0BQ99437 205 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 SLC25A2Q9BXI2 301 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 PARLQ9H300 379 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 ZNF355PQ9NSJ1 428 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 C21orf62Q9NYP8 219 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 MRPL36Q9P0J6 103 aaKnown RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 MRPL27Q9P0M9 148 aaKnown RBP3.47□□□□□ -1.85
SRP54-212ENST00000556992 TMEM14CQ9P0S9 112 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 PITPNC1Q9UKF7 332 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 DCHS2Q6V1P9 2916 aa3.47□□□□□ -1.85
SRP54-212ENST00000556992 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.85
SRP54-212ENST00000556992 ATRQ13535 2644 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 TRBV24-1A0A075B6N3 115 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms