RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 NUMA1Q14980 2115 aa2.29□□□□□ -2.04
SLIRP-208ENST00000556956 CEP350Q5VT06 3117 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 PPIAL4CA0A0B4J2A2 164 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 KBTBD11-OT1A0A1B0GTJ5 212 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 SERTM2A0A1B0GWG4 89 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 FBLL1A6NHQ2 334 aaKnown RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 SHISA9B4DS77 424 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 KLRC4-KLRK1H3BQV0 150 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 K7EQM0 130 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 SNAI2O43623 268 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV3-7P01780 117 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TCRAP04437 139 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CSN3P07498 182 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 PPIAL4GP0DN37 164 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CGB3P0DN86 165 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CGB7P0DN87 165 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 PYYP10082 97 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 FGF6P10767 208 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CFHR2P36980 270 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CKS1BP61024 79 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 GNG5P63218 68 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 Q0VFX4 171 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TAL2Q16559 108 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 ALKBH6Q3KRA9 238 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TCTEX1D4Q5JR98 221 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 Q5PR19 223 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 SPINK14Q6IE38 97 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 C16orf54Q6UWD8 224 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 PATE2Q6UY27 113 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 ADAMTSL5Q6ZMM2 481 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 BHLHA15Q7RTS1 189 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 LINC00305Q7Z4B0 112 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 S100A7AQ86SG5 101 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 ZCCHC24Q8N2G6 241 aaKnown RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 OR8A1Q8NGG7 326 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 OR10X1Q8NGY0 326 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 C8orf46Q8TAG6 207 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 SAP25Q8TEE9 199 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 CT55Q8WUE5 264 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 ITLN1Q8WWA0 313 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 NPIPB3Q92617 1050 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 RAB37Q96AX2 223 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 IFI27L1Q96BM0 104 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TRGV9Q99603 122 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 VGLL1Q99990 258 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 DCTN5Q9BTE1 182 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TTTY12Q9BZ98 90 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 VCX2Q9H322 139 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 AAMDCQ9H7C9 122 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 NDUFA4L2Q9NRX3 87 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 THYN1Q9P016 225 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 KLF13Q9Y2Y9 288 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 TIMM8BQ9Y5J9 83 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 R4GN57 208 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 U3KQA8 63 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 U3KQK5 164 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 DOCK9Q9BZ29 2069 aa2.28□□□□□ -2.04
SLIRP-208ENST00000556956 COL5A1P20908 1838 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-208ENST00000556956 FREM3P0C091 2139 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TRANK1O15050 2925 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TNRC6BQ9UPQ9 1833 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 IGKV1OR2-108A0A075B7D4 117 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TRGV5A0A0B4J1U4 118 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 IGHV3-64DA0A0J9YX35 117 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 LOC389332A0A1B0GUA5 103 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 hADV38S2A0JD32 116 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SRRM5B3KS81 715 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 NTN3O00634 580 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 TNFRSF13BO14836 293 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 ATP5LO75964 103 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 FSTL3O95633 263 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 NCR2O95944 276 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HBDP02042 147 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SAA1P0DJI8 122 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SAA2P0DJI9 122 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 CCL4P13236 92 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HLA-DRB4P13762 266 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MYOD1P15172 320 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 ORM2P19652 201 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 IGHV1-2P23083 117 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 HOXD3P31249 432 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MAGEA5P43359 124 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 RAB9AP51151 201 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF138P52744 262 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SMAGPQ0VAQ4 97 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 SRSF6Q13247 344 aaKnown RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 PLGLAQ15195 96 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 C17orf58Q2M2W7 97 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 VMA21Q3ZAQ7 101 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 LINC00322Q6ZN03 302 aaPredicted RBP2.27□□□□□ -2.05
SLIRP-208ENST00000556956 FOXI2Q6ZQN5 318 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 ZNF493Q6ZR52 646 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 Q6ZS92 163 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 PRNTQ86SH4 94 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 MOB3BQ86TA1 216 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 UBALD2Q8IYN6 164 aa2.27□□□□□ -2.05
SLIRP-208ENST00000556956 CEND1Q8N111 149 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms