RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 EMP1P54849 157 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 FXYD7P58549 80 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 AP3S2P59780 193 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 SUPT4H1P63272 117 aaKnown RBP4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 ZNF90Q03938 601 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 OR2F1Q13607 317 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 GAMTQ14353 236 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 TMEM128Q5BJH2 165 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 EBLN2Q6P2I7 272 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 OR8I2Q8N0Y5 310 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 TOMM5Q8N4H5 51 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 OR4B1Q8NGF8 309 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 MCFD2Q8NI22 146 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 NDUFAF3Q9BU61 184 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 RNF126Q9BV68 326 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 HLA-DRB4X5D2U9 266 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 MUC4Q99102 2169 aa4.78□□□□□ -1.64
AL390334.1-204ENST00000556890 TMEM189A5PLL7 270 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 CCDC160A6NGH7 325 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 H3BMQ9 156 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 P0DMU3 169 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 FAM231AP0DMU4 169 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 FAM231CP0DMU5 169 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 S100A7P31151 101 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 S100A5P33763 92 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 PSMB3P49720 205 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 DEFB1P60022 68 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 AKR1C1Q04828 323 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 GDF5OSQ5U4N7 250 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 FOXI2Q6ZQN5 318 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 CIB3Q96Q77 187 aaPredicted RBP4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 TRGV9Q99603 122 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 WDR12Q9GZL7 423 aaKnown RBP4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 SLIRPQ9GZT3 109 aaKnown RBP4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 SAV1Q9H4B6 383 aaPredicted RBP4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 RPRMQ9NS64 109 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 DNAH6Q9C0G6 4158 aa4.77□□□□□ -1.65
AL390334.1-204ENST00000556890 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SMCO3A2RU48 225 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SMIM9A6NGZ8 99 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 WRBO00258 174 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 ISLRO14498 428 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 TRIAP1O43715 76 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 CFDP00746 253 aaPredicted RBP4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 AMBPP02760 352 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 HOXB5P09067 269 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SPART-AS1P0CW21 52 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 GALR1P47211 349 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 INPP1P49441 399 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 MEOX2P50222 304 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 C12orf74Q32Q52 190 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SAMD13Q5VXD3 122 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SPATA31B1PQ5VZV4 182 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 GGNBP1Q5YKI7 109 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 ZNF705AQ6ZN79 300 aaPredicted RBP4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 UBE2DNLQ8IWF7 75 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 BPIFCQ8NFQ6 507 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 SLC25A21Q9BQT8 299 aaPredicted RBP4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 TMEM208Q9BTX3 173 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 MAGT1Q9H0U3 335 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 GOLT1BQ9Y3E0 138 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 TMED3Q9Y3Q3 217 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 RFNGQ9Y644 331 aa4.76□□□□□ -1.65
AL390334.1-204ENST00000556890 ZNF705FA8MVS1 300 aaPredicted RBP4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 F6UB75 175 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 H3BP45 60 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 SYNGR2O43760 224 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 PITX3O75364 302 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 IFNA21P01568 189 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 HBE1P02100 147 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 ZNF705DP0CH99 300 aaPredicted RBP4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 ZNF705BP0CI00 300 aaPredicted RBP4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 SLC25A6P12236 298 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 HTN3P15516 51 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 ORM2P19652 201 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 PSG9Q00887 426 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 FGL1Q08830 312 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 PPP1R1AQ13522 171 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 SPANXN5Q5MJ07 72 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 LINC00336Q6ZUF6 198 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 POM121L12Q8N7R1 296 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 LRTM2Q8N967 370 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 ZNF709Q8N972 641 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 THAP8Q8NA92 274 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 OR1B1Q8NGR6 318 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 CHAC2Q8WUX2 184 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 DEDD2Q8WXF8 326 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 TRIM63Q969Q1 353 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 SOSTQ9BQB4 213 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 NIPSNAP3BQ9BS92 247 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 TMEM147Q9BVK8 224 aa4.75□□□□□ -1.65
AL390334.1-204ENST00000556890 SLC35B3Q9H1N7 401 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms