RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SCGB2B2Q4G0G5 96 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 LHFPL1Q86WI0 220 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 LGI3Q8N145 548 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 COMMD3Q9UBI1 195 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 CDS2O95674 445 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 TMEM268Q5VZI3 342 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 LHFPL5Q8TAF8 219 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 C14orf166Q9Y224 244 aaKnown RBP9.58□□□□□ -0.88
ACTN1-219ENST00000556432 U3KQ87 197 aa9.58□□□□□ -0.88
ACTN1-219ENST00000556432 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 SIVA1O15304 175 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 GAGE7O76087 117 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 CD3DP04234 171 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 SULT1A3P0DMM9 295 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 SULT1A4P0DMN0 295 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 HOXA5P20719 270 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 SELENOHQ8IZQ5 122 aaKnown RBP9.57□□□□□ -0.88
ACTN1-219ENST00000556432 MARCH1Q8TCQ1 289 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 DTD1Q8TEA8 209 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 TMEM263Q8WUH6 116 aaKnown RBP9.57□□□□□ -0.88
ACTN1-219ENST00000556432 CACFD1Q9UGQ2 172 aa9.57□□□□□ -0.88
ACTN1-219ENST00000556432 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 HPGDSO60760 199 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 APOA1P02647 267 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 RLN2P04090 185 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 TERB2Q8NHR7 220 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
ACTN1-219ENST00000556432 GLYATL2Q8WU03 294 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 PAIP2BQ9ULR5 123 aaKnown RBP9.56□□□□□ -0.88
ACTN1-219ENST00000556432 VPS13BQ7Z7G8 4022 aa9.56□□□□□ -0.88
ACTN1-219ENST00000556432 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 H3BMQ9 156 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 ORM2P19652 201 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 TBPP20226 339 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 GCSHP23434 173 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 GPX4P36969 197 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-219ENST00000556432 CCDC28AQ8IWP9 274 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 OR4D10Q8NGI6 311 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 TRGV9Q99603 122 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 RBKSQ9H477 322 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 TNFRSF18Q9Y5U5 241 aa9.55□□□□□ -0.88
ACTN1-219ENST00000556432 A0A087WTM6 91 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 TRAV8-2A0A0B4J237 113 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 SNURFLB1AK76 121 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 H3BNG1 76 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 PRB4P10163 310 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-219ENST00000556432 S100A7P31151 101 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 GGNBP1Q5YKI7 109 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 RAB2BQ8WUD1 216 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 GPR82Q96P67 336 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 TMEM147Q9BVK8 224 aa9.54□□□□□ -0.88
ACTN1-219ENST00000556432 FAM25AB3EWG3 89 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 FAM25CB3EWG5 89 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 FAM25GB3EWG6 89 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 H7BYZ3 331 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 NXPH4O95158 308 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 RAB3DO95716 219 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 OR8A1Q8NGG7 326 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 OR52I2Q8NH67 350 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 TMPRSS5Q9H3S3 457 aa9.53□□□□□ -0.88
ACTN1-219ENST00000556432 A0A096LPF7 62 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 NOL3O60936 208 aaKnown RBP9.52□□□□□ -0.89
ACTN1-219ENST00000556432 CFDP00746 253 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-219ENST00000556432 CDKN1BP46527 198 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 TMBIM6P55061 237 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 TMED4Q7Z7H5 227 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 LINC00612Q8N6U2 182 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 LRRC20Q8TCA0 184 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 DYNC2LI1Q8TCX1 351 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 RBM38Q9H0Z9 239 aaKnown RBP9.52□□□□□ -0.89
ACTN1-219ENST00000556432 MIXL1Q9H2W2 232 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 HSPB7Q9UBY9 170 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 SLC45A2Q9UMX9 530 aa9.52□□□□□ -0.89
ACTN1-219ENST00000556432 IGKV1OR2-108A0A075B7D4 117 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 CCDC160A6NGH7 325 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 CCR6P51684 374 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-219ENST00000556432 RAB11AP62491 216 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 SMCO1Q147U7 214 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 AP3S1Q92572 193 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-219ENST00000556432 CCDC59Q9P031 241 aaKnown RBP9.51□□□□□ -0.89
ACTN1-219ENST00000556432 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 TMEM56-RWDD3S4R434 201 aa9.51□□□□□ -0.89
ACTN1-219ENST00000556432 TRGV2A0A075B6R0 118 aa9.5□□□□□ -0.89
ACTN1-219ENST00000556432 CRYM-AS1A6NIL9 109 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms