RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KANTRA0A1W2PQU2 76 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 NUPR2A6NF83 97 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 PRSS29PA6NIE9 313 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-216ENST00000556066 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 BCL2L11O43521 198 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 ATG12O94817 140 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 IGKV1-5P01602 117 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 OR5AC1P0C628 307 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 FCGR2BP31994 310 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-216ENST00000556066 NPBWR1P48145 328 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 PCP4P48539 62 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 HOXA1P49639 335 aaPredicted RBP4.94□□□□□ -1.62
PSEN1-216ENST00000556066 RAB14P61106 215 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 PAFAH1B2P68402 229 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 TNFRSF9Q07011 255 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 PRSS54Q6PEW0 395 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 TCF24Q7RTU0 167 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 LYZL2Q7Z4W2 148 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 SLC51BQ86UW2 128 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 KIR2DL5AQ8N109 375 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 ZNF114Q8NC26 417 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 KIR2DL5BQ8NHK3 375 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 LHFPL5Q8TAF8 219 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 RNASE8Q8TDE3 154 aaKnown RBP4.94□□□□□ -1.62
PSEN1-216ENST00000556066 ST8SIA2Q92186 375 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 RNF183Q96D59 192 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 GINS3Q9BRX5 216 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 MAP6D1Q9H9H5 199 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 ENY2Q9NPA8 101 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 KCNIP3Q9Y2W7 256 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 PUS1Q9Y606 427 aaKnown RBP eCLIP4.94□□□□□ -1.62
PSEN1-216ENST00000556066 HELTA6NFD8 242 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 DFFBO76075 338 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 APOHP02749 345 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 RLN2P04090 185 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 NMBP08949 121 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 OPRK1P41145 380 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 SUB1P53999 127 aaKnown RBP eCLIP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 CMC4P56277 68 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 S100A10P60903 97 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 RND3P61587 244 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 ZNF345Q14585 488 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 IAH1Q2TAA2 248 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 CEMP1Q6PRD7 247 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM217Q8N7C4 229 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 CCDC71LQ8N9Z2 235 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 BPIFCQ8NFQ6 507 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 GLYATL2Q8WU03 294 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 ZNF414Q96IQ9 312 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 ZNF471Q9BX82 626 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 CSTL1Q9H114 145 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 CYTL1Q9NRR1 136 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 HSPB7Q9UBY9 170 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 RABAC1Q9UI14 185 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 LSM5Q9Y4Y9 91 aaKnown RBP4.93□□□□□ -1.62
PSEN1-216ENST00000556066 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
PSEN1-216ENST00000556066 A0A0G2JRQ6 117 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 TEX46H3BTG2 121 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 CORTO00230 105 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM50AO95807 157 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
PSEN1-216ENST00000556066 IFNA21P01568 189 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 MBPP02686 304 aaPredicted RBP4.92□□□□□ -1.62
PSEN1-216ENST00000556066 RNASE2P10153 161 aaKnown RBP4.92□□□□□ -1.62
PSEN1-216ENST00000556066 DEFB131AP59861 70 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 USF2Q15853 346 aaPredicted RBP4.92□□□□□ -1.62
PSEN1-216ENST00000556066 FAM74A1Q5RGS3 127 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 FAM90A2PQ658T7 463 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 LEMD1Q68G75 181 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 SELENOHQ8IZQ5 122 aaKnown RBP4.92□□□□□ -1.62
PSEN1-216ENST00000556066 LGI3Q8N145 548 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 LRTM2Q8N967 370 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 NUDT10Q8NFP7 164 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 OR11H2Q8NH07 326 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 RARRES2Q99969 163 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 MS4A6AQ9H2W1 248 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM231Q9H6L2 316 aa4.92□□□□□ -1.62
PSEN1-216ENST00000556066 A0A1B0GU03 582 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 A0A1W2PS18 150 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 K7EPK0 472 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 DEFB4AO15263 64 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 NXPH3O95157 252 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 CD5P06127 495 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 P0C879 139 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 NPPCP23582 126 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 UCP1P25874 307 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 TIGITQ495A1 244 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM268Q5VZI3 342 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM88Q6PEY1 159 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 Q6ZRM9 215 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 STHQ8IWL8 128 aa4.91□□□□□ -1.62
PSEN1-216ENST00000556066 FAM24BQ8N5W8 94 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms