RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 GUCA1AP43080 201 aaPredicted RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 TMBIM6P55061 237 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 NDUFA6P56556 154 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 TAS2R45P59539 299 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 CCL20P78556 96 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 NAIPQ13075 1403 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 BCL2L15Q5TBC7 163 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 RPL22L1Q6P5R6 122 aaKnown RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 MMGT1Q8N4V1 131 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 PACRGLQ8N7B6 248 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 OR5A2Q8NGI9 324 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 NUP210Q8TEM1 1887 aaPredicted RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 RNASE6Q93091 150 aaKnown RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 TCEAL2Q9H3H9 227 aaPredicted RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 BOKQ9UMX3 212 aaPredicted RBP2.38□□□□□ -2.03
LINC00643-204ENST00000555934 ABCC10Q5T3U5 1492 aa2.38□□□□□ -2.03
LINC00643-204ENST00000555934 KTN1Q86UP2 1357 aaKnown RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 RALGAPA2Q2PPJ7 1873 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 POLR1AO95602 1720 aaPredicted RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 SUPT6HQ7KZ85 1726 aaKnown RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 LAMC3Q9Y6N6 1575 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 TRGV4A0A0C4DH28 118 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 SPAARA0A1B0GVQ0 90 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 A0A1B0GW54 56 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 ODAMA1E959 279 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 IFITM5A6NNB3 132 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 C17orf51A8MQB3 221 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 M0R378 163 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 SNAPC5O75971 98 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 CST7O76096 145 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 NAPSAO96009 420 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 PRM2P04554 102 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 AKAIN1P0CW23 69 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 FABP2P12104 132 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 ATP6V0CP27449 155 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 AKR1C2P52895 323 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 CDK6Q00534 326 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 AADACL3Q5VUY0 350 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 SSX8Q7RTT4 187 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 LINC00305Q7Z4B0 112 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 DAND5Q8N907 189 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 BRK1Q8WUW1 75 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 PP6455Q8WZ26 134 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 MAGOHBQ96A72 148 aaKnown RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 CCL26Q9Y258 94 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 RNF11Q9Y3C5 154 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 POLA1P09884 1462 aaPredicted RBP2.37□□□□□ -2.03
LINC00643-204ENST00000555934 GAPVD1Q14C86 1478 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 TEX14Q8IWB6 1497 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 TOPBP1Q92547 1522 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 ARHGEF12Q9NZN5 1544 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 DSCAML1Q8TD84 2053 aa2.37□□□□□ -2.03
LINC00643-204ENST00000555934 TRAPPC8Q9Y2L5 1435 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 IGHV1-58A0A0C4DH39 117 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 A0A0J9YX75 114 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 BBIP1A8MTZ0 92 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 BUB1B-PAK6H3BSN5 160 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 TMEM256-PLSCR3K7ERE1 68 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 HIST1H1BP16401 226 aaKnown RBP2.36□□□□□ -2.03
LINC00643-204ENST00000555934 S100A4P26447 101 aaKnown RBP2.36□□□□□ -2.03
LINC00643-204ENST00000555934 PSMB8P28062 276 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 RPL30P62888 115 aaKnown RBP2.36□□□□□ -2.03
LINC00643-204ENST00000555934 ZNF117Q03924 483 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 TRAPPC6BQ86SZ2 158 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 C10orf126Q8N4M7 172 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 OR4C12Q96R67 309 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 C1QTNF6Q9BXI9 259 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 TMEM191AQ9H0A3 160 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 IL36BQ9NZH7 164 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 KLK5Q9Y337 293 aaPredicted RBP2.36□□□□□ -2.03
LINC00643-204ENST00000555934 ADGRL2O95490 1459 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 FANCD2Q9BXW9 1451 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 KDM5DQ9BY66 1539 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 DSPPQ9NZW4 1301 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 MYH11P35749 1972 aa2.36□□□□□ -2.03
LINC00643-204ENST00000555934 ATG2BQ96BY7 2078 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 DICER1Q9UPY3 1922 aaKnown RBP2.35□□□□□ -2.03
LINC00643-204ENST00000555934 SHANK2Q9UPX8 1470 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 A0A0D9SEW6 157 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 CXCL1P09341 107 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 CRYGSP22914 178 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 RPL22P35268 128 aaKnown RBP2.35□□□□□ -2.03
LINC00643-204ENST00000555934 CSN1S1P47710 185 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 UBE2BP63146 152 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 RHOGP84095 191 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 HES1Q14469 280 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 LGALS9BQ3B8N2 356 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
LINC00643-204ENST00000555934 LGALS9CQ6DKI2 356 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms