RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PNRC2Q9NPJ4 139 aaKnown RBP6.9□□□□□ -1.31
LINC00641-201ENST00000555379 AURKAIP1Q9NWT8 199 aaPredicted RBP6.9□□□□□ -1.31
LINC00641-201ENST00000555379 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 FAM231BA6NCW3 169 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 EFNA2O43921 213 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 DUX4L9Q6RFH8 374 aaPredicted RBP6.89□□□□□ -1.31
LINC00641-201ENST00000555379 SIGLEC9Q9Y336 463 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 TICRRQ7Z2Z1 1910 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 C1QL2Q7Z5L3 287 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 LHFPL1Q86WI0 220 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 RNF152Q8N8N0 203 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 TCF15Q12870 199 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 NPIPB5A8MRT5 1133 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 C9JCJ5 164 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 SLC25A20O43772 301 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 CNTFRP26992 372 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 Q6P435 159 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 PIP4P2Q8N4L2 257 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 ZNF837Q96EG3 531 aaPredicted RBP6.89□□□□□ -1.31
LINC00641-201ENST00000555379 EAF1Q96JC9 268 aaPredicted RBP6.89□□□□□ -1.31
LINC00641-201ENST00000555379 OVOL2Q9BRP0 275 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 PRR13Q9NZ81 148 aa6.89□□□□□ -1.31
LINC00641-201ENST00000555379 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 RNASE8Q8TDE3 154 aaKnown RBP6.88□□□□□ -1.31
LINC00641-201ENST00000555379 MYOFQ9NZM1 2061 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 CACNA1CQ13936 2221 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 ZNF138P52744 262 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 SRSF1Q07955 248 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC00641-201ENST00000555379 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 BPESC1Q9GZL8 116 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 TMEM160Q9NX00 188 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 CNTRLQ7Z7A1 2325 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 NDUFA4O00483 81 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 CXCL1P09341 107 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 PSG8Q9UQ74 426 aa6.88□□□□□ -1.31
LINC00641-201ENST00000555379 KNL1Q8NG31 2342 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 C1QL1O75973 258 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 MALP21145 153 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 DEFB113Q30KQ7 82 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 C15orf32Q32M92 178 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 PRR32B1ATL7 298 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 FOXE3Q13461 319 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 SLC25A39Q9BZJ4 359 aaPredicted RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 RPL15P61313 204 aaKnown RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 MRPL27Q9P0M9 148 aaKnown RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 PSPNO60542 156 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 NSUN5P1Q3KNT7 163 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 CD177Q8N6Q3 437 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 KLHL30-AS1Q8NEE0 82 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 PTH2Q96A98 100 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 CD7P09564 240 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
LINC00641-201ENST00000555379 RNF138Q8WVD3 245 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 Q96MF0 132 aa6.87□□□□□ -1.31
LINC00641-201ENST00000555379 CCL25O15444 150 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 APOHP02749 345 aaPredicted RBP6.86□□□□□ -1.31
LINC00641-201ENST00000555379 RPL23P62829 140 aaKnown RBP6.86□□□□□ -1.31
LINC00641-201ENST00000555379 HGFACQ04756 655 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 CR1LQ2VPA4 569 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 FAM201AQ5SY85 155 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 TRIOBPQ9H2D6 2365 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 SEC16AO15027 2179 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 C22orf46C9J442 243 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 SAA4P35542 130 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 ZNF833PQ6ZTB9 187 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 RNF222A6NCQ9 220 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 BCL6BQ8N143 479 aaPredicted RBP6.86□□□□□ -1.31
LINC00641-201ENST00000555379 NLRC5Q86WI3 1866 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 PLXNA2O75051 1894 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 H3BMM0 161 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
LINC00641-201ENST00000555379 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
LINC00641-201ENST00000555379 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
LINC00641-201ENST00000555379 FSTL3O95633 263 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 UTF1Q5T230 341 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 FAM219BQ5XKK7 198 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 TMEM256Q8N2U0 113 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 ERG28Q9UKR5 140 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 GNG5P63218 68 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 TMEM14EPQ6UXP3 125 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 PTPRDP23468 1912 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 A0A1W2PPM0 123 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 IGHV3-11P01762 117 aa6.85□□□□□ -1.31
LINC00641-201ENST00000555379 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
LINC00641-201ENST00000555379 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms