RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 EFNA4P52798 201 aa18.82■□□□□ 0.6
STRN3-207ENST00000555358 C8orf46Q8TAG6 207 aa18.82■□□□□ 0.6
STRN3-207ENST00000555358 RPH3ALQ9UNE2 315 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 FAM208BQ5VWN6 2430 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 CRYBG3Q68DQ2 2970 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 UBR5O95071 2799 aaPredicted RBP18.81■□□□□ 0.6
STRN3-207ENST00000555358 C19orf71A6NCJ1 209 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 TOMM40O96008 361 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 LTAP01374 205 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 LGALS7P47929 136 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 PRR31Q5SQ13 230 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 TMEM116Q8NCL8 245 aa18.81■□□□□ 0.6
STRN3-207ENST00000555358 VPS13CQ709C8 3753 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 OVOL3O00110 214 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 TSPOP30536 169 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 HBBP68871 147 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 SRSF1Q07955 248 aaKnown RBP eCLIP18.8■□□□□ 0.6
STRN3-207ENST00000555358 KIR3DL3Q8N743 410 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 LY6G5BQ8NDX9 201 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 OR2D3Q8NGH3 330 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 GTSF1Q8WW33 167 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 ONECUT1Q9UBC0 465 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 TRAV9-2A0A087WT02 112 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 IGHV2-26A0A0B4J1V2 119 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 IGHV3-72A0A0B4J1Y9 119 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 Q56UQ5 140 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 CT83Q5H943 113 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 SPATA12Q7Z6I5 190 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 C5orf17Q8NAS9 161 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 FMC1Q96HJ9 113 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 ZNF492Q9P255 531 aa18.8■□□□□ 0.6
STRN3-207ENST00000555358 SPG11Q96JI7 2443 aa18.79■□□□□ 0.6
STRN3-207ENST00000555358 LRRK2Q5S007 2527 aa18.79■□□□□ 0.6
STRN3-207ENST00000555358 WNK2Q9Y3S1 2297 aa18.79■□□□□ 0.6
STRN3-207ENST00000555358 ENSAO43768 121 aaKnown RBP18.78■□□□□ 0.6
STRN3-207ENST00000555358 FAM120AOSQ5T036 256 aa18.78■□□□□ 0.6
STRN3-207ENST00000555358 TEX45Q8NA69 505 aa18.78■□□□□ 0.6
STRN3-207ENST00000555358 MRPS16Q9Y3D3 137 aaKnown RBP18.78■□□□□ 0.6
STRN3-207ENST00000555358 TCRAP04437 139 aa18.78■□□□□ 0.6
STRN3-207ENST00000555358 LIPFP07098 398 aa18.78■□□□□ 0.6
STRN3-207ENST00000555358 CRYGBP07316 175 aa18.78■□□□□ 0.6
STRN3-207ENST00000555358 A8MWL6 223 aa18.77■□□□□ 0.6
STRN3-207ENST00000555358 COX7A1P24310 79 aa18.77■□□□□ 0.6
STRN3-207ENST00000555358 RPL27AP46776 148 aaKnown RBP18.77■□□□□ 0.6
STRN3-207ENST00000555358 PLP1P60201 277 aa18.77■□□□□ 0.6
STRN3-207ENST00000555358 Q9H3A6 140 aa18.77■□□□□ 0.6
STRN3-207ENST00000555358 IGHV3-21A0A0B4J1V1 117 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 H3BTX0 84 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 APELAP0DMC3 54 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 CNTFRP26992 372 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 ARF6P62330 175 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 LEMD1Q68G75 181 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 C22orf15Q8WYQ4 148 aa18.77■□□□□ 0.59
STRN3-207ENST00000555358 C20orf202A1L168 122 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 P01737 135 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 IGLL1P15814 213 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 PAX2Q02962 417 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 IGFBPL1Q8WX77 278 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 PPP1R14DQ9NXH3 145 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 CLEC5AQ9NY25 188 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 SOX21Q9Y651 276 aaPredicted RBP18.76■□□□□ 0.59
STRN3-207ENST00000555358 LOC105371242A0A075B767 164 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 IGLV1-47P01700 117 aa18.76■□□□□ 0.59
STRN3-207ENST00000555358 SH2D7A6NKC9 451 aaPredicted RBP18.75■□□□□ 0.59
STRN3-207ENST00000555358 IGHV4-39P01824 125 aa18.75■□□□□ 0.59
STRN3-207ENST00000555358 CD24P25063 80 aa18.75■□□□□ 0.59
STRN3-207ENST00000555358 PGLYRP4Q96LB8 373 aa18.75■□□□□ 0.59
STRN3-207ENST00000555358 SPOCK3Q9BQ16 436 aa18.75■□□□□ 0.59
STRN3-207ENST00000555358 GSX1Q9H4S2 264 aaPredicted RBP18.75■□□□□ 0.59
STRN3-207ENST00000555358 SVEP1Q4LDE5 3571 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 RBP4P02753 201 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 ZFP36P26651 326 aaKnown RBP18.74■□□□□ 0.59
STRN3-207ENST00000555358 DMRTA1Q5VZB9 504 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 BPESC1Q9GZL8 116 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 GFRA4Q9GZZ7 299 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 M0QZ24 198 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 FOXA3P55318 350 aaPredicted RBP18.74■□□□□ 0.59
STRN3-207ENST00000555358 TMEM70Q9BUB7 260 aa18.74■□□□□ 0.59
STRN3-207ENST00000555358 FAM162BQ5T6X4 162 aa18.73■□□□□ 0.59
STRN3-207ENST00000555358 OR4F17Q8NGA8 305 aa18.73■□□□□ 0.59
STRN3-207ENST00000555358 SIGLEC9Q9Y336 463 aa18.73■□□□□ 0.59
STRN3-207ENST00000555358 NPIPB6E9PJ23 425 aa18.73■□□□□ 0.59
STRN3-207ENST00000555358 CRXO43186 299 aaPredicted RBP18.73■□□□□ 0.59
STRN3-207ENST00000555358 RBPMS2Q6ZRY4 209 aaKnown RBP18.73■□□□□ 0.59
STRN3-207ENST00000555358 CCL19Q99731 98 aa18.73■□□□□ 0.59
STRN3-207ENST00000555358 TEX22C9J3V5 150 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 HINT1P49773 126 aaPredicted RBP18.72■□□□□ 0.59
STRN3-207ENST00000555358 Q86TA4 180 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 TNFRSF14Q92956 283 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 RBM14Q96PK6 669 aaKnown RBP18.72■□□□□ 0.59
STRN3-207ENST00000555358 F11RQ9Y624 299 aaKnown RBP18.72■□□□□ 0.59
STRN3-207ENST00000555358 IGHV1-24A0A0C4DH33 117 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 BUB1B-PAK6H3BSN5 160 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 GOSR1O95249 250 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 CHCHD1Q96BP2 118 aaKnown RBP18.72■□□□□ 0.59
STRN3-207ENST00000555358 C1RLQ9NZP8 487 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 HIGD1AQ9Y241 93 aa18.72■□□□□ 0.59
STRN3-207ENST00000555358 A1L4Q6 167 aa18.71■□□□□ 0.59
STRN3-207ENST00000555358 OTORQ9NRC9 128 aa18.71■□□□□ 0.59
STRN3-207ENST00000555358 FAM231BA6NCW3 169 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms