RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 MAP1LC3BQ9GZQ8 125 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 TUBA4BQ9H853 241 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 MANBALQ9NQG1 85 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 NDUFA4L2Q9NRX3 87 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 VAX2Q9UIW0 290 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 VPS13CQ709C8 3753 aa3.99□□□□□ -1.77
LINC01550-204ENST00000554822 DIDO1Q9BTC0 2240 aaKnown RBP3.99□□□□□ -1.77
LINC01550-204ENST00000554822 HRNRQ86YZ3 2850 aaPredicted RBP3.99□□□□□ -1.77
LINC01550-204ENST00000554822 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 IGHV1-3A0A0C4DH29 117 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 A0A1B0GV50 99 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 A0A1W2PPR1 153 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SMCO3A2RU48 225 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 B4DEV8 164 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 TMEM250H0YL14 139 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 CDK2AP2O75956 126 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 CRYGBP07316 175 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 RNASE2P10153 161 aaKnown RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 PRTN3P24158 256 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 CEACAM3P40198 252 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 GPR6P46095 362 aaPredicted RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 RPL29P47914 159 aaKnown RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 UQCRFS1P47985 274 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 REG1BP48304 166 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 CDC34P49427 236 aaPredicted RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 PSMB3P49720 205 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 EFNA4P52798 201 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SUB1P53999 127 aaKnown RBP eCLIP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SSTP61278 116 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 HERV-K104P63124 156 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 DIAPH2-AS1Q14236 149 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 PVRIGQ6DKI7 326 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 LCN15Q6UWW0 184 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 TMEM144Q7Z5S9 345 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SLC35E3Q7Z769 313 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 PNKDQ8N490 385 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 C15orf54Q8N8G6 183 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 OR4P4Q8NGL7 312 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 RNASEH2CQ8TDP1 164 aaKnown RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 MGST2Q99735 147 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 TXNDC17Q9BRA2 123 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 C19orf24Q9BVV8 132 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 GGTLC1Q9BX51 225 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 ZNF430Q9H8G1 570 aaPredicted RBP3.98□□□□□ -1.77
LINC01550-204ENST00000554822 SMCO4Q9NRQ5 59 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 GNG13Q9P2W3 67 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 INSIG2Q9Y5U4 225 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 PXMP4Q9Y6I8 212 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 DOCK11Q5JSL3 2073 aa3.98□□□□□ -1.77
LINC01550-204ENST00000554822 A0A087WWC5 75 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 A0A1W2PPV4 95 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 C7orf77A4D0Y5 90 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 ZFP92A6NM28 416 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 ODF3BA8MYP8 253 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 OOSP1A8MZH6 123 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 H3BQ15 152 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 C19orf84I3L1E1 186 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 NUPL2O15504 423 aaKnown RBP3.97□□□□□ -1.77
LINC01550-204ENST00000554822 CRLF1O75462 422 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 YIF1AO95070 293 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 OR13C7P0DN81 318 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 HTR1DP28221 377 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 MEF2BQ02080 365 aaPredicted RBP3.97□□□□□ -1.77
LINC01550-204ENST00000554822 PAX2Q02962 417 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 PSG5Q15238 335 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 PRSS8Q16651 343 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 TPTE2P1Q5T6R2 138 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 CBLN2Q8IUK8 224 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 CYB561D1Q8N8Q1 229 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 OR10W1Q8NGF6 305 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 RXFP4Q8TDU9 374 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 RPEQ96AT9 228 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 TVP23CQ96ET8 276 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 SLC35E1Q96K37 410 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 NIPSNAP3BQ9BS92 247 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 HINT2Q9BX68 163 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 SLC25A22Q9H936 323 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 DPM3Q9P2X0 92 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 ONECUT1Q9UBC0 465 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 PRELID1Q9Y255 219 aa3.97□□□□□ -1.77
LINC01550-204ENST00000554822 IGKV3D-20A0A0C4DH25 116 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 IGLC7A0M8Q6 106 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 COLCA2A8K830 154 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 H7C423 109 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 M0R036 132 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 CORTO00230 105 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 ENSAO43768 121 aaKnown RBP3.96□□□□□ -1.78
LINC01550-204ENST00000554822 PDE6DO43924 150 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 LY6HO94772 140 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 CXorf1O96002 111 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 MT-CO2P00403 227 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 LINC00869P0C866 280 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 STAG3L2P0CL84 134 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 STAG3L3P0CL85 134 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 FOLR2P14207 255 aa3.96□□□□□ -1.78
LINC01550-204ENST00000554822 RPL35AP18077 110 aaKnown RBP3.96□□□□□ -1.78
LINC01550-204ENST00000554822 COX7A1P24310 79 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms