RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MARC2Q969Z3 335 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 PBDC1Q9BVG4 233 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 SH3BGRL3Q9H299 93 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 GNB4Q9HAV0 340 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 RPRMQ9NS64 109 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 TECRQ9NZ01 308 aaKnown RBP3.87□□□□□ -1.79
VTI1B-202ENST00000553619 FUT9Q9Y231 359 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 HIGD1AQ9Y241 93 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 TSSC4Q9Y5U2 329 aaPredicted RBP3.87□□□□□ -1.79
VTI1B-202ENST00000553619 ITPR3Q14573 2671 aa3.87□□□□□ -1.79
VTI1B-202ENST00000553619 NOTCH2Q04721 2471 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IGKV1D-37A0A075B6S9 117 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IGKV1OR2-108A0A075B7D4 117 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 TRAV1-1A0A0B4J248 108 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 WI2-2373I1.2A0A1W2PRP0 233 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 MFSD2BA6NFX1 497 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 SEC14L6B5MCN3 397 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 K7EMT4 169 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 YIF1AO95070 293 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 CXorf1O96002 111 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IGKV1-17P01599 117 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IGHV3-23P01764 117 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IL4P05112 153 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 CD5P06127 495 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 LGALS1P09382 135 aaKnown RBP3.86□□□□□ -1.79
VTI1B-202ENST00000553619 C8orf88P0DMB2 117 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 ORM2P19652 201 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 GATA2P23769 480 aaPredicted RBP3.86□□□□□ -1.79
VTI1B-202ENST00000553619 GPR183P32249 361 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 PSMB3P49720 205 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 LYZP61626 148 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 ZNF90Q03938 601 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 PMS2P11Q13670 270 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 RPEL1Q2QD12 228 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 KRTAP21-3Q3LHN1 58 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 KHDC3LQ587J8 217 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 FAM74A1Q5RGS3 127 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 IL34Q6ZMJ4 242 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 C19orf35Q6ZS72 473 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 LINC00305Q7Z4B0 112 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 GPHB5Q86YW7 130 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 C4orf3Q8WVX3 66 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 RAB24Q969Q5 203 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 RNF125Q96EQ8 232 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 GRAMD2BQ96HH9 432 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 GPR82Q96P67 336 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 METTL26Q96S19 204 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 TXNDC17Q9BRA2 123 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 TCEAL7Q9BRU2 100 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 SMDT1Q9H4I9 107 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM231Q9H6L2 316 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM167BQ9NRX6 74 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 MED9Q9NWA0 146 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 MRPL27Q9P0M9 148 aaKnown RBP3.86□□□□□ -1.79
VTI1B-202ENST00000553619 RABAC1Q9UI14 185 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 UFC1Q9Y3C8 167 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 PUS1Q9Y606 427 aaKnown RBP eCLIP3.86□□□□□ -1.79
VTI1B-202ENST00000553619 S4R3C0 116 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 ACANP16112 2415 aa3.86□□□□□ -1.79
VTI1B-202ENST00000553619 DCHS2Q6V1P9 2916 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 CENPEQ02224 2701 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 MAP1LC3B2A6NCE7 125 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 LINC00862A6NCI5 91 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 HSBP1L1C9JCN9 74 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 LINC01619G3V211 115 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 M0QZ24 198 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 LGALS9O00182 355 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 IGHV3-11P01762 117 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 NMBP08949 121 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 STAG3L2P0CL84 134 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 STAG3L3P0CL85 134 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 S100PP25815 95 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 PCP4P48539 62 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 MEOX2P50222 304 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 KIAA0141Q14154 515 aaPredicted RBP3.85□□□□□ -1.79
VTI1B-202ENST00000553619 PEA15Q15121 130 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 CD300EQ496F6 205 aaPredicted RBP3.85□□□□□ -1.79
VTI1B-202ENST00000553619 KHDC1LQ5JSQ8 128 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 C1orf194Q5T5A4 169 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 UQCC3Q6UW78 93 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 LCN15Q6UWW0 184 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 TOMM20LQ6UXN7 152 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 BPIFA4PQ86YQ2 179 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 RPP25LQ8N5L8 163 aaKnown RBP3.85□□□□□ -1.79
VTI1B-202ENST00000553619 OR4F17Q8NGA8 305 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 LYPD6BQ8NI32 183 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 MYOZ3Q8TDC0 251 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 OR4F4Q96R69 305 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 CHRDL1Q9BU40 450 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 NKX6-2Q9C056 277 aaPredicted RBP3.85□□□□□ -1.79
VTI1B-202ENST00000553619 MAP1LC3BQ9GZQ8 125 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 OR51M1Q9H341 326 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 HRH4Q9H3N8 390 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 VSIRQ9H7M9 311 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 CLEC5AQ9NY25 188 aa3.85□□□□□ -1.79
VTI1B-202ENST00000553619 MRPL36Q9P0J6 103 aaKnown RBP3.85□□□□□ -1.79
VTI1B-202ENST00000553619 PEMTQ9UBM1 199 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms