RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ORM2P19652 201 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 COL8A2P25067 703 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 CEACAM3P40198 252 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 CAMPP49913 170 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 RBX1P62877 108 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 SRSF2Q01130 221 aaKnown RBP4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 DEFB109BQ30KR1 87 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 FBLN7Q53RD9 439 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 BVES-AS1Q5T3Y7 98 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 LINC00322Q6ZN03 302 aaPredicted RBP4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 TCF24Q7RTU0 167 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 PPP1R27Q86WC6 154 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 BPIFA4PQ86YQ2 179 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 RPRMLQ8N4K4 120 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 DEFB108BQ8NET1 73 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 OR1B1Q8NGR6 318 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 OR1N2Q8NGR9 330 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 OR10AG1Q8NH19 301 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 PIFOQ8TCI5 191 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 SLC25A39Q9BZJ4 359 aaPredicted RBP4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 NGBQ9NPG2 151 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 ZNRD1Q9P1U0 126 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 CTSZQ9UBR2 303 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 U3KQK5 164 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 INTS1Q8N201 2190 aaKnown RBP4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 OTOGLQ3ZCN5 2332 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 LAMA1P25391 3075 aa4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 CNOT1A5YKK6 2376 aaKnown RBP4.17□□□□□ -1.74
TMEM55B-204ENST00000553602 EP300Q09472 2414 aaPredicted RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 GVINP1Q7Z2Y8 2422 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 LOC105371242A0A075B767 164 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 IGHV1-3A0A0C4DH29 117 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 LINC01546A6NGU7 62 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 LY6LH3BQJ8 138 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 BUB1B-PAK6H3BSN5 160 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 TAX1BP3O14907 124 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 MRPS12O15235 138 aaKnown RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 SIVA1O15304 175 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CD5LO43866 347 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 IGKV1-17P01599 117 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CT45A10P0DMU9 189 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 COX8AP10176 69 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 PSG1P11464 419 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 HTR1DP28221 377 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 S100A7P31151 101 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 GPR6P46095 362 aaPredicted RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 HINT1P49773 126 aaPredicted RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CCL8P80075 99 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 FAM27E3Q08E93 113 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 SRSF6Q13247 344 aaKnown RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 PLGLAQ15195 96 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 PSG3Q16557 428 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 LGALS9BQ3B8N2 356 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 MAJINQ3KP22 176 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 LGALS9CQ6DKI2 356 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 UNQ5815/PRO19632Q6UWF5 114 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 SIGLEC15Q6ZMC9 328 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 OR9G4Q8NGQ1 327 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 BLNKQ8WV28 456 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 NEU4Q8WWR8 484 aaPredicted RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 SRSF12Q8WXF0 261 aaKnown RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 RNASE6Q93091 150 aaKnown RBP4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 PGLYRP4Q96LB8 373 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 RASL11BQ9BPW5 248 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 ZNF747Q9BV97 191 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CNFNQ9BYD5 112 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 CEP250Q9BV73 2442 aa4.16□□□□□ -1.74
TMEM55B-204ENST00000553602 A0A0G2JNJ9 132 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 WI2-2373I1.2A0A1W2PRP0 233 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 ZNF785A8K8V0 405 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 NPIPB5A8MRT5 1133 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 K7EIM0 57 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 PRRG2O14669 202 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 SCGB2A1O75556 95 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 NDUFA3O95167 84 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 PLAUP00749 431 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 HLA-DRB4P13762 266 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 APOBEC3AP31941 199 aaPredicted RBP4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 LYZP61626 148 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 BSPH1Q075Z2 132 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 DIAPH2-AS1Q14236 149 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 KLK9Q2XQG4 91 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 MPV17L2Q567V2 206 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 GOLT1AQ6ZVE7 132 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 FA2HQ7L5A8 372 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 KIR3DL3Q8N743 410 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 DEFB124Q8NES8 71 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 NPBQ8NG41 125 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 OR4C5Q8NGB2 326 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 RNF125Q96EQ8 232 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 ZC2HC1AQ96GY0 325 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 SPOCK3Q9BQ16 436 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 PEF1Q9UBV8 284 aaKnown RBP4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 Q9UFV3 132 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 RALYQ9UKM9 306 aaKnown RBP4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 KLK9Q9UKQ9 250 aa4.15□□□□□ -1.75
TMEM55B-204ENST00000553602 PSG8Q9UQ74 426 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms