RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 S100A8P05109 93 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
ATXN3-221ENST00000553498 CTSGP08311 255 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 CXCL1P09341 107 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 IGHV4-38-2P0DP08 117 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 ERVFC1-1P60608 527 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 RANP62826 216 aaKnown RBP5.7□□□□□ -1.5
ATXN3-221ENST00000553498 ATP5G2Q06055 141 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 ECSCRQ19T08 205 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 C15orf32Q32M92 178 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 KLF17Q5JT82 389 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-221ENST00000553498 RUSC1-AS1Q66K80 236 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 BAGE2Q86Y30 109 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 CMTM2Q8TAZ6 248 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 CLEC5AQ9NY25 188 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 IL36BQ9NZH7 164 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 USF3Q68DE3 2245 aa5.7□□□□□ -1.5
ATXN3-221ENST00000553498 CFAP46Q8IYW2 2715 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 ARID1AO14497 2285 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 DOPEY1Q5JWR5 2465 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 MALRD1Q5VYJ5 2156 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 A0A0G2JLM5 398 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 A1L4Q6 167 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 H3BUX3 64 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 J3QKU1 62 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 K7EN84 100 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 FSHBP01225 129 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 TCRAP04437 139 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 AMY1AP04745 511 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 RPEL1Q2QD12 228 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 CT83Q5H943 113 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 IBA57Q5T440 356 aaKnown RBP5.69□□□□□ -1.5
ATXN3-221ENST00000553498 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 BRD3OSQ6XYD6 125 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 Q9H3A6 140 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 AAMDCQ9H7C9 122 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 ZFP30Q9Y2G7 519 aa5.69□□□□□ -1.5
ATXN3-221ENST00000553498 IGSF10Q6WRI0 2623 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 A0A087X0K7 114 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 A0A1W2PPQ1 181 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 OR2T8A6NH00 312 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 MRPS12O15235 138 aaKnown RBP5.68□□□□□ -1.5
ATXN3-221ENST00000553498 TGFAP01135 160 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 LTAP01374 205 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 MT-ND6P03923 174 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 CLEC3BP05452 202 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 PPIFP30405 207 aaKnown RBP5.68□□□□□ -1.5
ATXN3-221ENST00000553498 CSN1S1P47710 185 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 USF2Q15853 346 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-221ENST00000553498 Q5PR19 223 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 WDR73Q6P4I2 378 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 ZNF414Q96IQ9 312 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 MLST8Q9BVC4 326 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 PRDM13Q9H4Q3 707 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 ZNF492Q9P255 531 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 V9GYV3 84 aa5.68□□□□□ -1.5
ATXN3-221ENST00000553498 UBR5O95071 2799 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 PKDREJQ9NTG1 2253 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 IGHV3OR16-10A0A075B7F0 116 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 SMIM27A0A1W2PRY6 76 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 ZNF320A2RRD8 509 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 PGPEP1LA6NFU8 196 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BKO60814 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 IGLV2-8P01709 118 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 TRGC2P03986 189 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BJP06899 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 IGHV4-31P0DP07 118 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HOXA5P20719 270 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BOP23527 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 GPR183P32249 361 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 COA6Q5JTJ3 125 aaKnown RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-221ENST00000553498 CYB5R2Q6BCY4 276 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 TOMM20LQ6UXN7 152 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 SIGLEC15Q6ZMC9 328 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 TMEM219Q86XT9 240 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 TMEM183AQ8IXX5 376 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 ZFP82Q8N141 532 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 OR4B1Q8NGF8 309 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 METTL26Q96S19 204 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 SLC50A1Q9BRV3 221 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 GNB1LQ9BYB4 327 aa5.67□□□□□ -1.5
ATXN3-221ENST00000553498 GFRA4Q9GZZ7 299 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms