RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TMEM254Q8TBM7 123 aa1.84□□□□□ -2.11
SCFD1-209ENST00000553280 CARD19Q96LW7 228 aa1.84□□□□□ -2.11
SCFD1-209ENST00000553280 ZNF714Q96N38 554 aa1.84□□□□□ -2.11
SCFD1-209ENST00000553280 OR2H1Q9GZK4 316 aa1.84□□□□□ -2.11
SCFD1-209ENST00000553280 BAZ2BQ9UIF8 2168 aaKnown RBP1.83□□□□□ -2.12
SCFD1-209ENST00000553280 SORL1Q92673 2214 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 NISCHQ9Y2I1 1504 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV3D-7A0A0C4DH55 119 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV3OR2-268A0A0C4DH90 116 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 TRDV1A0A1B0GX56 115 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 K7ERJ3 54 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 PRB1P04280 392 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 IFNA4P05014 189 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 TOMM20LQ6UXN7 152 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 OR5D16Q8NGK9 328 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 ISOC1Q96CN7 298 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 BORCS8Q96FH0 119 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 RMND5BQ96G75 393 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-209ENST00000553280 CCDC32Q9BV29 185 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 CACYBPQ9HB71 228 aaKnown RBP1.83□□□□□ -2.12
SCFD1-209ENST00000553280 NDUFAF1Q9Y375 327 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 RNF11Q9Y3C5 154 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 ASB4Q9Y574 426 aa1.83□□□□□ -2.12
SCFD1-209ENST00000553280 ANAPC1Q9H1A4 1944 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 TRBV6-8A0A0A6YYG3 113 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV2-29A2NJV5 120 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-209ENST00000553280 B4DSR2 109 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 C17orf112F2Z3M2 114 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 H3BQV1 296 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 CST7O76096 145 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 OR10J4P0C629 311 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 HBBP68871 147 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 KLRD1Q13241 179 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 TAC4Q86UU9 113 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 ANGPTL5Q86XS5 388 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 CLECL1Q8IZS7 167 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 OR5D14Q8NGL3 314 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 OR4K15Q8NH41 348 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 OTORQ9NRC9 128 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 RASL12Q9NYN1 266 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 CHCHD2Q9Y6H1 151 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-209ENST00000553280 TNS3Q68CZ2 1445 aa1.82□□□□□ -2.12
SCFD1-209ENST00000553280 DOCK4Q8N1I0 1966 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 PIK3C2AO00443 1686 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 FREM1Q5H8C1 2179 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 TCRBV4S1A1TA0A5B7 111 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 RPL35P42766 123 aaKnown RBP1.81□□□□□ -2.12
SCFD1-209ENST00000553280 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-209ENST00000553280 KRTAP21-3Q3LHN1 58 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 C4orf22Q6V702 233 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 THEM6Q8WUY1 208 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 C4orf3Q8WVX3 66 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 POP5Q969H6 163 aaKnown RBP1.81□□□□□ -2.12
SCFD1-209ENST00000553280 EFCAB11Q9BUY7 163 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 KLK9Q9UKQ9 250 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 ANKRD30AQ9BXX3 1397 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 MICAL3Q7RTP6 2002 aa1.81□□□□□ -2.12
SCFD1-209ENST00000553280 NUP98P52948 1817 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 MYH2Q9UKX2 1941 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV2D-26A0A0A0MRZ7 120 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 PRORSD1PA6NEY8 169 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 H7BYZ3 331 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 RER1O15258 196 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 FAM107AO95990 144 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-209ENST00000553280 IGLV1-51P01701 117 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 SAMD13Q5VXD3 122 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 AKAP14Q86UN6 197 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 ST6GALNAC3Q8NDV1 305 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 GRPEL2Q8TAA5 225 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 ANP32BQ92688 251 aaKnown RBP1.8□□□□□ -2.12
SCFD1-209ENST00000553280 CHCHD1Q96BP2 118 aaKnown RBP1.8□□□□□ -2.12
SCFD1-209ENST00000553280 LRTM1Q9HBL6 345 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 LAMTOR2Q9Y2Q5 125 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 SDK1Q7Z5N4 2213 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 TRAPPC8Q9Y2L5 1435 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 FRMPD1Q5SYB0 1578 aa1.8□□□□□ -2.12
SCFD1-209ENST00000553280 RP1P56715 2156 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 IGKV3-7A0A075B6H7 116 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 A0A087WX48 190 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 ZNF736B4DX44 427 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-209ENST00000553280 E7EUB6 86 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 TSTD3H0UI37 97 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 GABARAPH6UMI1 98 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 BCL2P10415 239 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 RAB5CP51148 216 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 TMEM128Q5BJH2 165 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 C2orf82Q6UX34 121 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 Q8N814 137 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 NAT8BQ9UHF3 227 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 SNURFQ9Y675 71 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 KDM6AO15550 1401 aaPredicted RBP1.79□□□□□ -2.12
SCFD1-209ENST00000553280 NUP210LQ5VU65 1888 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 MYH3P11055 1940 aa1.79□□□□□ -2.12
SCFD1-209ENST00000553280 RTL9Q8NET4 1388 aa1.78□□□□□ -2.12
SCFD1-209ENST00000553280 A0A087WSZ3 146 aa1.78□□□□□ -2.12
SCFD1-209ENST00000553280 CCDC160A6NGH7 325 aa1.78□□□□□ -2.12
SCFD1-209ENST00000553280 M0R233 179 aa1.78□□□□□ -2.12
SCFD1-209ENST00000553280 NBEAP1P0C6P0 100 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms