RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 RNF222A6NCQ9 220 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 SMIM9A6NGZ8 99 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 C15orf62A8K5M9 175 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 CEBPZOSA8MTT3 80 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 TEX22C9J3V5 150 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 E7EUB6 86 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 SMLR1H3BR10 107 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 NDUFA4O00483 81 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 SSSCA1O60232 199 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 NUDT3O95989 172 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 C4BPBP20851 252 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 FUSP35637 526 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKCH-203ENST00000552875 BAXQ07812 192 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 OR2F1Q13607 317 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 LRRC37A5PQ49AS3 106 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 C10orf55Q5SWW7 151 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 TMEM14EPQ6UXP3 125 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 ACOT7LQ6ZUV0 252 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 GBGT1Q8N5D6 347 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 CSNK1G2-AS1Q8NCQ2 148 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 OR11H4Q8NGC9 324 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 LINC00588Q9Y4M8 146 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 U3KQ87 197 aa6.1□□□□□ -1.43
PRKCH-203ENST00000552875 L7N2F9 121 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 CRYGCP07315 174 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 HTR2BP41595 481 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 HOXA1P49639 335 aaPredicted RBP6.09□□□□□ -1.43
PRKCH-203ENST00000552875 VAMP2P63027 116 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 ERHP84090 104 aaKnown RBP6.09□□□□□ -1.43
PRKCH-203ENST00000552875 WT1-ASQ06250 92 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 C2orf83Q53S99 150 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 SSX7Q7RTT5 188 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 ZNF546Q86UE3 836 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 C9orf62Q8N4C0 152 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 TMEM252Q8N6L7 170 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 TMEM116Q8NCL8 245 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 SLC24A4Q8NFF2 622 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 NEU1Q99519 415 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 RHPN1-AS1Q9BWJ2 59 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 SLC25A31Q9H0C2 315 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 SMPXQ9UHP9 88 aa6.09□□□□□ -1.43
PRKCH-203ENST00000552875 LRP2P98164 4655 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 FXYD6-FXYD2A0A087WZ82 144 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 A0A0D9SG52 128 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 PMS2P5A8MQ11 134 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 BOLA2-SMG1P6H3BVE0 249 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 CORTO00230 105 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 ARPC5O15511 151 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 CYB5BO43169 146 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 NXPH3O95157 252 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 RNASE2P10153 161 aaKnown RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 IAPPP10997 89 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 RPL12P30050 165 aaKnown RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 SULT1A1P50225 295 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 DAD1P61803 113 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 RPP30P78346 268 aaKnown RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 SPSB3Q6PJ21 355 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 LINC00528Q8N1L1 170 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 KCNRGQ8N5I3 272 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 INO80EQ8NBZ0 244 aaPredicted RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 OR10W1Q8NGF6 305 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 OR1P1Q8NH06 330 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 TMEM170AQ8WVE7 144 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 BSCL2Q96G97 398 aaPredicted RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 ENY2Q9NPA8 101 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 HEYLQ9NQ87 328 aaPredicted RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 PSENENQ9NZ42 101 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 STRAPQ9Y3F4 350 aaKnown RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 HSPB11Q9Y547 144 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 F11RQ9Y624 299 aaKnown RBP6.08□□□□□ -1.44
PRKCH-203ENST00000552875 RFNGQ9Y644 331 aa6.08□□□□□ -1.44
PRKCH-203ENST00000552875 TRAV2A0A0B4J234 112 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 IGHV7-4-1A0A0J9YVY3 117 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 IGSF23A1L1A6 192 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 MFSD2BA6NFX1 497 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 FAM24AA6NFZ4 105 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 FNDC10F2Z333 226 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 CHEK1O14757 476 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 OR13C7P0DN81 318 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 CXCL2P19875 107 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 NUP62P37198 522 aaPredicted RBP6.07□□□□□ -1.44
PRKCH-203ENST00000552875 CAV2P51636 162 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 SUB1P53999 127 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRKCH-203ENST00000552875 LINC00315P59091 139 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 RAB11AP62491 216 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 RPL11P62913 178 aaKnown RBP6.07□□□□□ -1.44
PRKCH-203ENST00000552875 LGALSLQ3ZCW2 172 aaPredicted RBP6.07□□□□□ -1.44
PRKCH-203ENST00000552875 SPINK9Q5DT21 86 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 STX12Q86Y82 276 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 ZNF502Q8TBZ5 544 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 RNASEH2CQ8TDP1 164 aaKnown RBP6.07□□□□□ -1.44
PRKCH-203ENST00000552875 GGACTQ9BVM4 153 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
PRKCH-203ENST00000552875 ZFAND3Q9H8U3 227 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms