RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 TRAV9-2A0A087WT02 112 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 C19orf71A6NCJ1 209 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 HIGD1CA8MV81 97 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 DLEU1O43261 78 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 FCN3O75636 299 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 GOSR1O95249 250 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 LTAP01374 205 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 RBP4P02753 201 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 LINC00614P0C842 121 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 ZNF25P17030 456 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 ORM2P19652 201 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 FOXA3P55318 350 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 HBBP68871 147 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 SLC35B1P78383 322 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 SSBP2P81877 361 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 BSPH1Q075Z2 132 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 SLAQ13239 276 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 TNXAQ16473 311 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 LYPD2Q6UXB3 125 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 LYPD1Q8N2G4 141 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 OR8B3Q8NGG8 313 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 RCHY1Q96PM5 261 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 OR8B2Q96RD0 313 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 NDFIP1Q9BT67 221 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 KLK15Q9H2R5 256 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 MRPL36Q9P0J6 103 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 HIGD1AQ9Y241 93 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 SIGLEC9Q9Y336 463 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 MRPS16Q9Y3D3 137 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 INSIG2Q9Y5U4 225 aa4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 F11RQ9Y624 299 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 RAI1Q7Z5J4 1906 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-210ENST00000552620 TNCP24821 2201 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 A0A1B0GW15 77 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 M0R2Z0 102 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 MOSP00540 346 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 PLAUP00749 431 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 CA1P00915 261 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 IGLV1-47P01700 117 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 P01737 135 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TCRAP04437 139 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 OR5AL1P0C617 328 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 GP9P14770 177 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM11P17152 192 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 NTF3P20783 257 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 COL8A2P25067 703 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 HNRNPA3P51991 378 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 RBPJQ06330 500 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 C10orf55Q5SWW7 151 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 GDF5OSQ5U4N7 250 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 HCP5Q6MZN7 132 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 RBPMS2Q6ZRY4 209 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 PPP1R27Q86WC6 154 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 C11orf42Q8N5U0 333 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 BLNKQ8WV28 456 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TXN2Q99757 166 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM208Q9BTX3 173 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 CLEC7AQ9BXN2 247 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 Q9H3A6 140 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 LPAR2Q9HBW0 351 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 DYNLRB1Q9NP97 96 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 CTSZQ9UBR2 303 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 ZFP30Q9Y2G7 519 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 GOLT1BQ9Y3E0 138 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 CADP27708 2225 aa4.74□□□□□ -1.65
CHMP4A-210ENST00000552620 TRAV30A0A087WSZ9 112 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 IGHV2-26A0A0B4J1V2 119 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 IGHV1-3A0A0C4DH29 117 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 IGHV1-69-2A0A0G2JMI3 117 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 SHISA9B4DS77 424 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 E7EQL1 145 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 BUB1B-PAK6H3BSN5 160 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 I3L2K1 104 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 K7EM74 188 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 K7EQM0 130 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 CRXO43186 299 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 G0S2P27469 103 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 CAMPP49913 170 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 GNG5P63218 68 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 RELQ04864 619 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 RIGQ13278 110 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 DIAPH2-AS1Q14236 149 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 SERTAD4-AS1Q5TG53 156 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 PRR27Q6MZM9 219 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 GFRALQ6UXV0 394 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 ZNF841Q6ZN19 808 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 Q6ZN92 141 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 FAM19A2Q8N3H0 131 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 SCNM1Q9BWG6 230 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 LAMTOR2Q9Y2Q5 125 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 FRYLO94915 3013 aa4.73□□□□□ -1.65
CHMP4A-210ENST00000552620 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms