RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CRTAPO75718 401 aaPredicted RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM50AO95807 157 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 CRYZL1O95825 349 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 PRM2P04554 102 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 MT1HL1P0DM35 61 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 PTHLHP12272 177 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 HIST1H1DP16402 221 aaKnown RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 NFYAP23511 347 aaPredicted RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 DTYMKP23919 212 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 CRYBB3P26998 211 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 MAS1LP35410 378 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 SERPINB10P48595 397 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 CLDN12P56749 244 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 OR10A3P58181 314 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 PLP1P60201 277 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 KRTAP10-1P60331 282 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 RPS25P62851 125 aaKnown RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 GUCA2BQ16661 112 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 RNF212Q495C1 297 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 DNAL1Q4LDG9 190 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TOMM20LQ6UXN7 152 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 Q6ZSA8 131 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 C6orf223Q8N319 242 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 STX19Q8N4C7 294 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 GDPD1Q8N9F7 314 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 CD300LFQ8TDQ1 290 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 GIMAP1Q8WWP7 306 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 MAFIPQ8WZ33 124 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 MRGPRFQ96AM1 343 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 FAM3DQ96BQ1 224 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM101Q96IK0 257 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 SPIN2AQ99865 258 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 SPIN2BQ9BPZ2 258 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 RHPN1-AS1Q9BWJ2 59 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 TMEM59Q9BXS4 323 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 C20orf85Q9H1P6 137 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 MS4A6AQ9H2W1 248 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 DAZ1Q9NQZ3 744 aaKnown RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 ENOPH1Q9UHY7 261 aa1.56□□□□□ -2.16
CPSF6-207ENST00000551516 F11RQ9Y624 299 aaKnown RBP1.56□□□□□ -2.16
CPSF6-207ENST00000551516 IGKV1D-37A0A075B6S9 117 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 TRAV1-2A0A0B4J238 106 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 TRAV10A0A0B4J240 114 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OR2T8A6NH00 312 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 IGLL5B9A064 214 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 H7C2Y5 167 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 M0R2N4 97 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 PPP1R2P9O14990 202 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 CD2P06729 351 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 GIPP09681 153 aaPredicted RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 MIFP14174 115 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 HIST1H1BP16401 226 aaKnown RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 HLA-GP17693 338 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 RPL27AP46776 148 aaKnown RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 WNT4P56705 351 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 DEFB131AP59861 70 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 DEFB1P60022 68 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 KRTAP10-12P60413 245 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 PPP3R1P63098 170 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 MED21Q13503 144 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF79Q15937 498 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 TNXAQ16473 311 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OGFRL1Q5TC84 451 aaPredicted RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 GDF5OSQ5U4N7 250 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 HACD4Q5VWC8 232 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 TMPRSS11AQ6ZMR5 421 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF818PQ6ZRF7 136 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF767PQ75MW2 155 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 SLC16A13Q7RTY0 426 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 ZNF546Q86UE3 836 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 JAGN1Q8N5M9 183 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 MS4A15Q8N5U1 240 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OR10R2Q8NGX6 335 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OR1P1Q8NH06 330 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OR5B3Q8NH48 314 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 OR4A5Q8NH83 315 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 TSEN15Q8WW01 171 aaKnown RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 EEF1AKMT3Q96AZ1 226 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 CPNE2Q96FN4 548 aaPredicted RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 ADTRPQ96IZ2 230 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 FAM210BQ96KR6 192 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 Q96MT0 163 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 GPER1Q99527 375 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 HSD17B10Q99714 261 aaKnown RBP1.55□□□□□ -2.16
CPSF6-207ENST00000551516 CCL28Q9NRJ3 127 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 PLEKHJ1Q9NW61 149 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 COA4Q9NYJ1 87 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 C21orf62Q9NYP8 219 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 RAB22AQ9UL26 194 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 UFC1Q9Y3C8 167 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 LINC00588Q9Y4M8 146 aa1.55□□□□□ -2.16
CPSF6-207ENST00000551516 FSIP2Q5CZC0 6907 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 A0A075B6Q4 140 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 DEFB131BA0A096LNP1 70 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 IGHV3-49A0A0A0MS15 119 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 NBDYA0A0U1RRE5 68 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 PNMA8CA0A1B0GUJ8 204 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 TRDV1A0A1B0GX56 115 aa1.54□□□□□ -2.16
CPSF6-207ENST00000551516 LRCOL1A6NCL2 159 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms