RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 MRPL52Q86TS9 123 aaKnown RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF567Q8N184 647 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 LRRC18Q8N456 261 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 OR4K15Q8NH41 348 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 RAB2BQ8WUD1 216 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 STACQ99469 402 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 ANAPC13Q9BS18 74 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TXNIPQ9H3M7 391 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 DUSP21Q9H596 190 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF391Q9UJN7 358 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 OR52A1Q9UKL2 312 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TRAV8-3A0A0A6YYJ7 113 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 IGHV3-15A0A0B4J1V0 119 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 PNMA8CA0A1B0GUJ8 204 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 A0A1W2PQL4 384 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 C20orf202A1L168 122 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 NUPR2A6NF83 97 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 C17orf51A8MQB3 221 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 F5H5P2 479 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 SMLR1H3BR10 107 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 K7EP13 123 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 M0QXV9 152 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 M0R036 132 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 PDCD6O75340 191 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 CA2P00918 260 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 IFNA17P01571 189 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 IGLV6-57P01721 117 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HLA-AP01891 365 aaKnown RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 OPN1SWP03999 348 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 NBEAP1P0C6P0 100 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 RD3LP0DJH9 198 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 KDELR1P24390 212 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 GLRXP35754 106 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 KLF3P57682 345 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HBG1P69891 147 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HBG2P69892 147 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 MYL5Q02045 173 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 OR8G1Q15617 311 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 PLPPR5Q32ZL2 321 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 PDZD11Q5EBL8 140 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 SPIN3Q5JUX0 258 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 AMMECR1LQ6DCA0 310 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 LAMTOR1Q6IAA8 161 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HAGHLQ6PII5 290 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 DNM1P34Q6PK57 102 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 GRINAQ7Z429 371 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 S100A7AQ86SG5 101 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 LRRC28Q86X40 367 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HS3ST5Q8IZT8 346 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 GDPD1Q8N9F7 314 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 OR52E4Q8NGH9 312 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 OR9Q1Q8NGQ5 310 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 OR11L1Q8NGX0 322 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TWIST2Q8WVJ9 160 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 C1orf54Q8WWF1 131 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TLCD1Q96CP7 247 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 CPNE2Q96FN4 548 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 LINC01587Q99440 93 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 GINS4Q9BRT9 223 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 NMNAT1Q9HAN9 279 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 CACYBPQ9HB71 228 aaKnown RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 RHOFQ9HBH0 211 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 SLC2A9Q9NRM0 540 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 C1orf109Q9NX04 203 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 SNX12Q9UMY4 172 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 ANGPT4Q9Y264 503 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TBL2Q9Y4P3 447 aaKnown RBP2.38□□□□□ -2.03
LIMA1-205ENST00000550592 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 TNCP24821 2201 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
LIMA1-205ENST00000550592 A0A096LPI6 279 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IGLV3-32A0A0A0MS00 114 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IGHV2-26A0A0B4J1V2 119 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 A8MWP4 228 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 DISC1C4P0D8 188 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 H3BP45 60 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 K7ERU9 68 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 CYB5BO43169 146 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 GADD45GO95257 159 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PDYNP01213 254 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IGF2P01344 180 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IGKV1D-33P01593 117 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 IGKV1-33P01594 117 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 C1QBP02746 253 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 TRGV3P03979 118 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 SHBGP04278 402 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 OR10J4P0C629 311 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PSMB9P28065 219 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 S100GP29377 79 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 MAP2K4P45985 399 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 RPL14P50914 215 aaKnown RBP2.37□□□□□ -2.03
LIMA1-205ENST00000550592 AQP5P55064 265 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 CDC42P60953 191 aa2.37□□□□□ -2.03
LIMA1-205ENST00000550592 PPP3R1P63098 170 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms