RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 K7EIM0 57 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
CDX2-202ENST00000548877 TMEM50AO95807 157 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 IAPPP10997 89 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 SULT1A2P50226 295 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 SPANXN5Q5MJ07 72 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 SLC25A24Q6NUK1 477 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 OR10W1Q8NGF6 305 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
CDX2-202ENST00000548877 PARD6GQ9BYG4 376 aaPredicted RBP9.79□□□□□ -0.84
CDX2-202ENST00000548877 F11RQ9Y624 299 aaKnown RBP9.79□□□□□ -0.84
CDX2-202ENST00000548877 IGHV3OR16-8A0A075B7F1 116 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 CST7O76096 145 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 NXPH3O95157 252 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 SPP1P10451 314 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 HSPE1P61604 102 aaKnown RBP9.78□□□□□ -0.84
CDX2-202ENST00000548877 RELQ04864 619 aaPredicted RBP9.78□□□□□ -0.84
CDX2-202ENST00000548877 CLINT1Q14677 625 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 TMEM14EPQ6UXP3 125 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 TMEM14BQ9NUH8 114 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 AGRNO00468 2067 aa9.78□□□□□ -0.84
CDX2-202ENST00000548877 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
CDX2-202ENST00000548877 TFPI2P48307 235 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 RAB11AP62491 216 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 PAFAH1B2P68402 229 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 FAM74A1Q5RGS3 127 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 Q6ZR54 194 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 EIF4E3Q8N5X7 224 aaKnown RBP9.77□□□□□ -0.85
CDX2-202ENST00000548877 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 OR1L8Q8NGR8 309 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 GGACTQ9BVM4 153 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 WFDC1Q9HC57 220 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
CDX2-202ENST00000548877 NDUFA4L2Q9NRX3 87 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 PLA2G2EQ9NZK7 142 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 X6R8D5 127 aa9.77□□□□□ -0.85
CDX2-202ENST00000548877 TEX50A0A1B0GTY4 177 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 RAB19A4D1S5 217 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 H3BP45 60 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 METTL15P1P0C7V9 234 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 HOXA1P49639 335 aaPredicted RBP9.76□□□□□ -0.85
CDX2-202ENST00000548877 SLC38A11Q08AI6 406 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 MORN3Q6PF18 240 aaPredicted RBP9.76□□□□□ -0.85
CDX2-202ENST00000548877 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 DPPA3Q6W0C5 159 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 TXN2Q99757 166 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 TMEM147Q9BVK8 224 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 VSIRQ9H7M9 311 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 OR51B2Q9Y5P1 312 aa9.76□□□□□ -0.85
CDX2-202ENST00000548877 LRP1BQ9NZR2 4599 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 TEX46H3BTG2 121 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 DEFB131AP59861 70 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 Q56UQ5 140 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 TCF24Q7RTU0 167 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 TRPT1Q86TN4 253 aaKnown RBP9.75□□□□□ -0.85
CDX2-202ENST00000548877 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 GBGT1Q8N5D6 347 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 HSD17B11Q8NBQ5 300 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 PSMG3Q9BT73 122 aaPredicted RBP9.75□□□□□ -0.85
CDX2-202ENST00000548877 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 UQCC1Q9NVA1 299 aa9.75□□□□□ -0.85
CDX2-202ENST00000548877 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 DEFB131BA0A096LNP1 70 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 IGHV3-21A0A0B4J1V1 117 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 M0R2N4 97 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 NUPL2O15504 423 aaKnown RBP9.74□□□□□ -0.85
CDX2-202ENST00000548877 CDK2AP2O75956 126 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 IFNA10P01566 189 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 ATP6V0CP27449 155 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 RAB2AP61019 212 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 SERF2P84101 59 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 PRCDQ00LT1 54 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 STHQ8IWL8 128 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 CSNK1G2-AS1Q8NCQ2 148 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 OR2G3Q8NGZ4 309 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 TIMM9Q9Y5J7 89 aa9.74□□□□□ -0.85
CDX2-202ENST00000548877 IGHV3-49A0A0A0MS15 119 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 INS-IGF2F8WCM5 200 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 I3L2K1 104 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 MPDU1O75352 247 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 CAMLGP49069 296 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 MFAP4P55083 255 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 PXDC1Q5TGL8 231 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 LEMD1Q68G75 181 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 OR8G2PQ6IF36 304 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 FAM24BQ8N5W8 94 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 OR1P1Q8NH06 330 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 PCNPQ8WW12 178 aaKnown RBP9.73□□□□□ -0.85
CDX2-202ENST00000548877 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
CDX2-202ENST00000548877 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 C17orf112F2Z3M2 114 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 YIF1AO95070 293 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 HBE1P02100 147 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms