RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 CLEC5AQ9NY25 188 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 S4R3C0 116 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 CENPEQ02224 2701 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 TRBV19A0A075B6N1 114 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 A0A1W2PS18 150 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 GGTLC3B5MD39 225 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 NDUFA4O00483 81 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 PEX7O00628 323 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 HOXA3O43365 443 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-215ENST00000547672 IGHV3-23P01764 117 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-215ENST00000547672 BMI1P35226 326 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 ADMP35318 185 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 MYCNOSP40205 109 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 GALR1P47211 349 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 CSN1S1P47710 185 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 RPL15P61313 204 aaKnown RBP10.44□□□□□ -0.74
PTCH1-215ENST00000547672 UBE2G1P62253 170 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 FOXE3Q13461 319 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-215ENST00000547672 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 CCDC140Q96MF4 163 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 ATG101Q9BSB4 218 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 ELOVL1Q9BW60 279 aa10.44□□□□□ -0.74
PTCH1-215ENST00000547672 APCP25054 2843 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 COLCA2A8K830 154 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 GGCTO75223 188 aaKnown RBP10.43□□□□□ -0.74
PTCH1-215ENST00000547672 CFHR3Q02985 330 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 FMC1Q96HJ9 113 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 Q9H3A6 140 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 YAE1D1Q9NRH1 226 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 LINC00527Q9UJ94 153 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 FBN2P35556 2912 aa10.43□□□□□ -0.74
PTCH1-215ENST00000547672 IGLC2P0DOY2 106 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 FOLR2P14207 255 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 LEMD1Q68G75 181 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 Q8N2B8 174 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 SIGLECL1Q8N7X8 197 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 OR4X2Q8NGF9 303 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 OCC1Q8TAD7 63 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 NOL4LQ96MY1 436 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-215ENST00000547672 ZNF586Q9NXT0 402 aa10.42□□□□□ -0.74
PTCH1-215ENST00000547672 TMA7Q9Y2S6 64 aaKnown RBP10.42□□□□□ -0.74
PTCH1-215ENST00000547672 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 TRBV6-1A0A0K0K1D8 114 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 PSMB8P28062 276 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 BAGE2Q86Y30 109 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 CIARTQ8N365 385 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-215ENST00000547672 FAM24BQ8N5W8 94 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 OR10G8Q8NGN5 311 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 ZNF414Q96IQ9 312 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 DERL1Q9BUN8 251 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 PEF1Q9UBV8 284 aaKnown RBP10.41□□□□□ -0.74
PTCH1-215ENST00000547672 MLXQ9UH92 298 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 ABCA1O95477 2261 aa10.41□□□□□ -0.74
PTCH1-215ENST00000547672 TRAV9-1A0A075B6T8 112 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 A0A087X0K7 114 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 K7EMT4 169 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 ISLRO14498 428 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 BUB3O43684 328 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 TCRAP04437 139 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 CRYBA1P05813 215 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 RAB5AP20339 215 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 CENPWQ5EE01 88 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 SAMD13Q5VXD3 122 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 SLC50A1Q9BRV3 221 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 POLQO75417 2590 aa10.4□□□□□ -0.74
PTCH1-215ENST00000547672 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
PTCH1-215ENST00000547672 GCGP01275 180 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 RAB5BP61020 215 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 FOXL1Q12952 345 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 ZNF418Q8TF45 676 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-215ENST00000547672 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 U3KQE9 123 aa10.39□□□□□ -0.75
PTCH1-215ENST00000547672 CREBBPQ92793 2442 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 CSPG4Q6UVK1 2322 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 ELOBQ15370 118 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 Q6ZS46 218 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
PTCH1-215ENST00000547672 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms