RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	ZNF136	P52737	540 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	TAS2R45	P59539	299 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	TMEM155	Q4W5P6	130 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	C9orf153	Q5TBE3	101 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	TMEM91	Q6ZNR0	172 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	C2orf15	Q8WU43	125 aa	Known RBP	2.58	□□□□□ -2
LGR5-204	ENST00000547310	ZC2HC1A	Q96GY0	325 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	AGPAT4-IT1	Q9H0P7	198 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	C16orf95	Q9H693	158 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	CA10	Q9NS85	328 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	TP73-AS1	Q9UF72	201 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	KLK5	Q9Y337	293 aa	Predicted RBP	2.58	□□□□□ -2
LGR5-204	ENST00000547310	NLRC5	Q86WI3	1866 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	ADGRL1	O94910	1474 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	CFTR	P13569	1480 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	ARHGAP5	Q13017	1502 aa		2.58	□□□□□ -2
LGR5-204	ENST00000547310	DYSF	O75923	2080 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	CEP170	Q5SW79	1584 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	ZC3H13	Q5T200	1668 aa	Known RBP	2.57	□□□□□ -2
LGR5-204	ENST00000547310	ANKRD31	Q8N7Z5	1873 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	IGKV6-21	A0A0C4DH24	114 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	BUB1B-PAK6	H3BSN5	160 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310		M0R2P5	195 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	MRPS14	O60783	128 aa	Known RBP	2.57	□□□□□ -2
LGR5-204	ENST00000547310	HIST1H2BK	O60814	126 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	HIST1H2BJ	P06899	126 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	CXCL1	P09341	107 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	ZNF286B	P0CG31	522 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	DYNLT3	P51808	116 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	ARPP19	P56211	112 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	GNGT1	P63211	74 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	LGALS9B	Q3B8N2	356 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	C10orf91	Q5T1B1	145 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	LAIR2	Q6ISS4	152 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	PDPN	Q86YL7	162 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	BPIFA4P	Q86YQ2	179 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	HIST3H2BB	Q8N257	126 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	ZNF645	Q8N7E2	425 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	MORN4	Q8NDC4	146 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	ATP6V0E2	Q8NHE4	81 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	OTOS	Q8NHW6	89 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	SCRT1	Q9BWW7	348 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	TSSK6	Q9BXA6	273 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	TXNL4B	Q9NX01	149 aa	Known RBP	2.57	□□□□□ -2
LGR5-204	ENST00000547310	IL36B	Q9NZH7	164 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	LINC00312	Q9Y6C7	94 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	TET2	Q6N021	2002 aa	Predicted RBP	2.57	□□□□□ -2
LGR5-204	ENST00000547310	FANCM	Q8IYD8	2048 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	CASKIN1	Q8WXD9	1431 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	RIMBP3C	A6NJZ7	1639 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	RIMBP3B	A6NNM3	1639 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	RIMBP3	Q9UFD9	1639 aa		2.57	□□□□□ -2
LGR5-204	ENST00000547310	LRRIQ1	Q96JM4	1722 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	ECM29	Q5VYK3	1845 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	MIA3	Q5JRA6	1907 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	IGLV4-60	A0A075B6I1	120 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	TRBV20-1	A0A075B6N2	111 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310		A0A0D9SG52	128 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310		H3BQ15	152 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310		H3BT86	120 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SYNGR2	O43760	224 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	IGHV3-11	P01762	117 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	TRAC	P01848	142 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SLC25A5	P05141	298 aa	Known RBP	2.56	□□□□□ -2
LGR5-204	ENST00000547310	INAFM2	P0DMQ5	153 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SNCA	P37840	140 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	LSM3	P62310	102 aa	Known RBP	2.56	□□□□□ -2
LGR5-204	ENST00000547310	DEFA5	Q01523	94 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	AKR1C1	Q04828	323 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310		Q0VG73	95 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	LINC01554	Q52M75	96 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	MPV17L2	Q567V2	206 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	ZNF678	Q5SXM1	525 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	OR2T2	Q6IF00	324 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	LYPD2	Q6UXB3	125 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	PP632	Q6XCG6	107 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310		Q6ZS92	163 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	ZNF101	Q8IZC7	436 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	WFDC11	Q8NEX6	87 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	STAG3L4	Q8TBR4	150 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	C10orf82	Q8WW14	230 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	POP5	Q969H6	163 aa	Known RBP	2.56	□□□□□ -2
LGR5-204	ENST00000547310	RBMXL1	Q96E39	390 aa	Known RBP	2.56	□□□□□ -2
LGR5-204	ENST00000547310	PRELID3A	Q96N28	172 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	CAMK2N2	Q96S95	79 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	PLA2G2F	Q9BZM2	168 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SND1-IT1	Q9HBX3	110 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SLC39A9	Q9NUM3	307 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	C21orf62	Q9NYP8	219 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	SERP1	Q9Y6X1	66 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	PXDNL	A1KZ92	1463 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	RBBP6	Q7Z6E9	1792 aa	Known RBP	2.56	□□□□□ -2
LGR5-204	ENST00000547310	ZSWIM8	A7E2V4	1837 aa		2.56	□□□□□ -2
LGR5-204	ENST00000547310	TRGV5	A0A0B4J1U4	118 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	IGHV1OR15-9	A0A0B4J2B8	117 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	IGKV1-9	A0A0C4DH69	117 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310		A0A0J9YW62	118 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	MCRIP1	C9JLW8	97 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	YPEL1	O60688	119 aa		2.55	□□□□□ -2
LGR5-204	ENST00000547310	SLIT3	O75094	1523 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms