RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 ZNF785A8K8V0 405 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 I3L2K1 104 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 CNIH1O95406 144 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 IGKV1-17P01599 117 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
LDLR-204ENST00000545707 FAM120AOSQ5T036 256 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 DMRTA1Q5VZB9 504 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 Q86TA4 180 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
LDLR-204ENST00000545707 TRAV9-2A0A087WT02 112 aa12.52□□□□□ -0.4
LDLR-204ENST00000545707 PLP1P60201 277 aa12.52□□□□□ -0.4
LDLR-204ENST00000545707 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.4
LDLR-204ENST00000545707 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.4
LDLR-204ENST00000545707 IGHV1-24A0A0C4DH33 117 aa12.52□□□□□ -0.41
LDLR-204ENST00000545707 CSN3P07498 182 aa12.52□□□□□ -0.41
LDLR-204ENST00000545707 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
LDLR-204ENST00000545707 A0A1W2PRD5 423 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 A0A1W2PRF3 423 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 A0A1W2PRM7 423 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 TCF15Q12870 199 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 GAGE1Q13065 139 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 OTORQ9NRC9 128 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 ZNF492Q9P255 531 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 ONECUT1Q9UBC0 465 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 HILPDAQ9Y5L2 63 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 H0Y8G0 127 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 CHEK1O14757 476 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 TIMM23O14925 209 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 SIAH2O43255 324 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
LDLR-204ENST00000545707 UNQ5815/PRO19632Q6UWF5 114 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
LDLR-204ENST00000545707 hDV102S1A0JD36 115 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 CD3EP07766 207 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 CT83Q5H943 113 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 TNFRSF14Q92956 283 aa12.5□□□□□ -0.41
LDLR-204ENST00000545707 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
LDLR-204ENST00000545707 OR4C46A6NHA9 309 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 B9A039 149 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 K7EIM0 57 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 M0R3E3 92 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 TCF21O43680 179 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 OVOL3O00110 214 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 LEPROTL1O95214 131 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 LINC00614P0C842 121 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 ARF6P62330 175 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 RBPJQ06330 500 aa12.49□□□□□ -0.41
LDLR-204ENST00000545707 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 APOHP02749 345 aaPredicted RBP12.48□□□□□ -0.41
LDLR-204ENST00000545707 MUC15Q8N387 334 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 IL4P05112 153 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
LDLR-204ENST00000545707 KLRD1Q13241 179 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 OR4F17Q8NGA8 305 aa12.48□□□□□ -0.41
LDLR-204ENST00000545707 FAM90A27PA6NNH2 459 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 TMUB1Q9BVT8 246 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
LDLR-204ENST00000545707 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 LY6LH3BQJ8 138 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 CRIP1P50238 77 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 RBM14Q96PK6 669 aaKnown RBP12.47□□□□□ -0.41
LDLR-204ENST00000545707 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
LDLR-204ENST00000545707 HTR1DP28221 377 aa12.46□□□□□ -0.41
LDLR-204ENST00000545707 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
LDLR-204ENST00000545707 SIGLEC15Q6ZMC9 328 aa12.46□□□□□ -0.41
LDLR-204ENST00000545707 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.41
LDLR-204ENST00000545707 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
LDLR-204ENST00000545707 MRPS16Q9Y3D3 137 aaKnown RBP12.46□□□□□ -0.41
LDLR-204ENST00000545707 SOX21Q9Y651 276 aaPredicted RBP12.46□□□□□ -0.41
LDLR-204ENST00000545707 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.42
LDLR-204ENST00000545707 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.46□□□□□ -0.42
LDLR-204ENST00000545707 ERASQ7Z444 233 aa12.46□□□□□ -0.42
LDLR-204ENST00000545707 C8orf49Q96NF6 230 aa12.46□□□□□ -0.42
LDLR-204ENST00000545707 SCNM1Q9BWG6 230 aa12.46□□□□□ -0.42
LDLR-204ENST00000545707 PSG8Q9UQ74 426 aa12.46□□□□□ -0.42
LDLR-204ENST00000545707 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 HAX1O00165 279 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 IGHV3-23P01764 117 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
LDLR-204ENST00000545707 PAX2Q02962 417 aa12.45□□□□□ -0.42
LDLR-204ENST00000545707 HES1Q14469 280 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms