RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 MS4A10Q96PG2 267 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 PITPNC1Q9UKF7 332 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 TRAPPC1Q9Y5R8 145 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 A6NDX4 124 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 ZNF705GA8MUZ8 300 aaPredicted RBP12.96□□□□□ -0.33
CHFR-224ENST00000545046 AVPP01185 164 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 CLEC3BP05452 202 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 CRIP2P52943 208 aaPredicted RBP12.96□□□□□ -0.33
CHFR-224ENST00000545046 FAM231DQ6ZW35 169 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
CHFR-224ENST00000545046 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
CHFR-224ENST00000545046 TRBV7-1A0A0A6YYK4 115 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 M0QZK8 103 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 BMPR1BO00238 502 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.34
CHFR-224ENST00000545046 COL8A1P27658 744 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 RPL15P61313 204 aaKnown RBP12.96□□□□□ -0.34
CHFR-224ENST00000545046 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 SGK494Q96LW2 274 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 C17orf77Q96MU5 243 aa12.96□□□□□ -0.34
CHFR-224ENST00000545046 A0A096LNT2 108 aa12.95□□□□□ -0.34
CHFR-224ENST00000545046 J3QLI3 93 aa12.95□□□□□ -0.34
CHFR-224ENST00000545046 GATCO43716 136 aaKnown RBP12.95□□□□□ -0.34
CHFR-224ENST00000545046 ATP5G2Q06055 141 aa12.95□□□□□ -0.34
CHFR-224ENST00000545046 BEX4Q9NWD9 120 aaPredicted RBP12.95□□□□□ -0.34
CHFR-224ENST00000545046 VPS13CQ709C8 3753 aa12.95□□□□□ -0.34
CHFR-224ENST00000545046 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
CHFR-224ENST00000545046 PRR27Q6MZM9 219 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
CHFR-224ENST00000545046 MEOX2P50222 304 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 PDE6HQ13956 83 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 C12orf57Q99622 126 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 LINC00527Q9UJ94 153 aa12.94□□□□□ -0.34
CHFR-224ENST00000545046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■■□ 21.7
CHFR-224ENST00000545046 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 K7EQM0 130 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 TGFAP01135 160 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 LTAP01374 205 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
CHFR-224ENST00000545046 SIGLEC15Q6ZMC9 328 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 GOLT1AQ6ZVE7 132 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 NUDT10Q8NFP7 164 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 NUDT11Q96G61 164 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 CCDC140Q96MF4 163 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 CELSR2Q9HCU4 2923 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 SMIM27A0A1W2PRY6 76 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 IGHG2P01859 326 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 IGF1P05019 195 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 TOMM20LQ6UXN7 152 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 GRAMD2BQ96HH9 432 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
CHFR-224ENST00000545046 EPG5Q9HCE0 2579 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 S100A2P29034 98 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 PSG9Q00887 426 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 DEFB113Q30KQ7 82 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 LRRC75A-AS1Q8N1F1 130 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 CSMD1Q96PZ7 3565 aa12.92□□□□□ -0.34
CHFR-224ENST00000545046 XKRY2A2RUG3 117 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 TRGV3P03979 118 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 MAPK1IP1LQ8NDC0 245 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 ATP6V0BQ99437 205 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 LRRK2Q5S007 2527 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 RAB9AP51151 201 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 TCL1AP56279 114 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
CHFR-224ENST00000545046 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 Q86TA4 180 aa12.91□□□□□ -0.34
CHFR-224ENST00000545046 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 IER3P46695 156 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 COX19Q49B96 90 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 PDZD11Q5EBL8 140 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 GPR61Q9BZJ8 451 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 ZFAND3Q9H8U3 227 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 MAP1AP78559 2803 aaPredicted RBP12.9□□□□□ -0.34
CHFR-224ENST00000545046 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 MBD6Q96DN6 1003 aa12.9□□□□□ -0.34
CHFR-224ENST00000545046 DAZAP1Q96EP5 407 aaKnown RBP12.9□□□□□ -0.34
CHFR-224ENST00000545046 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 IFITM10A6NMD0 228 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 H3BUA1 57 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 SPINK4O60575 86 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 CA1P00915 261 aaPredicted RBP12.89□□□□□ -0.35
CHFR-224ENST00000545046 CBLN1P23435 193 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 CSN1S1P47710 185 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms