RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ANGPT4Q9Y264 503 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 HS3ST2Q9Y278 367 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 RBM7Q9Y580 266 aaKnown RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 CITO14578 2027 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 NUP210LQ5VU65 1888 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 MYH4Q9Y623 1939 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 HEATR5AQ86XA9 2040 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 A0A096LNT2 108 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 TRAV38-1A0A0B4J264 116 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 A0A0D9SEW6 157 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 C1orf232A0A0U1RR37 186 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 TRAPPC13A5PLN9 417 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 GOLGA8KD6RF30 607 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 GOLGA8MH3BSY2 632 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 H7C2G1 150 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 ORC5O43913 435 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 CRPP02741 224 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 STATHP02808 62 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 TYMSP04818 313 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 RPSAP08865 295 aaKnown RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 LGALS1P09382 135 aaKnown RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 CCL4P13236 92 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 PSMB6P28072 239 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 SLCO1A2P46721 670 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 CDC34P49427 236 aaPredicted RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 CXCR4P61073 352 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 CCL7P80098 99 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 TMED1Q13445 227 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 ELOBQ15370 118 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 Q1T7F1 81 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 LRRC75BQ2VPJ9 315 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 ACSM3Q53FZ2 586 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 HIST2H3AQ71DI3 136 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 SLC36A1Q7Z2H8 476 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 TMEM86AQ8N2M4 240 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 RPP25LQ8N5L8 163 aaKnown RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 OR51D1Q8NGF3 324 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 JOSD2Q8TAC2 188 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 ZNF418Q8TF45 676 aaPredicted RBP0.54□□□□□ -2.32
YBX3-214ENST00000544501 SMIM19Q96E16 107 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 CHST6Q9GZX3 395 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 HRASLSQ9HDD0 168 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 MED12Q93074 2177 aa0.54□□□□□ -2.32
YBX3-214ENST00000544501 HEATR5BQ9P2D3 2071 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 KIAA2026Q5HYC2 2103 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 GGT3PA6NGU5 568 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ARL5CA6NH57 179 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 C10orf142B7Z368 130 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 M0QX08 132 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 COX7A2LO14548 114 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 PFDN6O15212 129 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 LY6G6CO95867 125 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 TPM3P06753 285 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 TFPTP0C1Z6 253 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 COX5BP10606 129 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 CASQ1P31415 396 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 MAP2K4P45985 399 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 RPL28P46779 137 aaKnown RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 HAAOP46952 286 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 REG1BP48304 166 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 EIF2B2P49770 351 aaKnown RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 RAB13P51153 203 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 RAB14P61106 215 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 RPL30P62888 115 aaKnown RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 TPM4P67936 248 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 EMX1Q04741 257 aaPredicted RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 PLCXD2Q0VAA5 305 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 MOGQ16653 247 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 DEFB133Q30KQ1 61 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ARHGAP11BQ3KRB8 267 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 DEFB121Q5J5C9 76 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 C9orf64Q5T6V5 341 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 Q5VSD8 79 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 C7orf65Q6ZTY9 151 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 DCXRQ7Z4W1 244 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 UMODL1-AS1Q8N2C9 162 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 TBC1D19Q8N5T2 526 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 TMEM251Q8N6I4 163 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 HAVCR2Q8TDQ0 301 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ISOC1Q96CN7 298 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 GNPNAT1Q96EK6 184 aaPredicted RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 KCTD7Q96MP8 289 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ADAT1Q9BUB4 502 aaKnown RBP0.53□□□□□ -2.32
YBX3-214ENST00000544501 DKKL1Q9UK85 242 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ANAPC10Q9UM13 185 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 COQ4Q9Y3A0 265 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 GMEB1Q9Y692 573 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 DENND4CQ5VZ89 1909 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 CCDC88CQ9P219 2028 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
YBX3-214ENST00000544501 MYH7P12883 1935 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 MYH9P35579 1960 aaKnown RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 MEIS3P1A6NDR6 274 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 OR51F1A6NGY5 319 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 EVPLLA8MZ36 301 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 C21orf140B9A014 251 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 I3L521 148 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 NSA2O95478 260 aaKnown RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 MSMBP08118 114 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms