RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 FMC1Q96HJ9 113 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 KLF12Q9Y4X4 402 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 ABCA1O95477 2261 aa13.37□□□□□ -0.27
PTPRO-209ENST00000543886 TCRAP04437 139 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 USF2Q15853 346 aaPredicted RBP13.36□□□□□ -0.27
PTPRO-209ENST00000543886 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 A8MWP6 167 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 TMEM219Q86XT9 240 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 NRGNQ92686 78 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 SMIM12Q96EX1 92 aa13.36□□□□□ -0.27
PTPRO-209ENST00000543886 SH2D7A6NKC9 451 aaPredicted RBP13.35□□□□□ -0.27
PTPRO-209ENST00000543886 C15orf32Q32M92 178 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 FAM231DQ6ZW35 169 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 SGK494Q96LW2 274 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 GPR82Q96P67 336 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 NDUFAF3Q9BU61 184 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 C7orf69Q9H7B7 122 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 TRBV19A0A075B6N1 114 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 IGLC2P0DOY2 106 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 FOSL1P15407 271 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 RHOGP84095 191 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 PRR27Q6MZM9 219 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 EXOC3-AS1Q8N2X6 119 aa13.35□□□□□ -0.27
PTPRO-209ENST00000543886 IGHV4-38-2P0DP08 117 aa13.34□□□□□ -0.27
PTPRO-209ENST00000543886 TCL1AP56279 114 aa13.34□□□□□ -0.27
PTPRO-209ENST00000543886 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
PTPRO-209ENST00000543886 SMIM27A0A1W2PRY6 76 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 G3V318 75 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 CTSGP08311 255 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 CBLN1P23435 193 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 CHRDL1Q9BU40 450 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 MEGF9Q9H1U4 602 aa13.33□□□□□ -0.27
PTPRO-209ENST00000543886 LINC01548A6NM66 108 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 B4DSR2 109 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 LTAP01374 205 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 IER3P46695 156 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 RAB4BP61018 213 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 KLK9Q2XQG4 91 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 ZNF502Q8TBZ5 544 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.28
PTPRO-209ENST00000543886 UTP20O75691 2785 aaKnown RBP13.32□□□□□ -0.28
PTPRO-209ENST00000543886 TRBV9A0A0B4J1U6 114 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 S100A7P31151 101 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 GPR183P32249 361 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 IQCJQ1A5X6 159 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 BCL6BQ8N143 479 aaPredicted RBP13.32□□□□□ -0.28
PTPRO-209ENST00000543886 RABAC1Q9UI14 185 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 A1L4Q6 167 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
PTPRO-209ENST00000543886 CA1P00915 261 aaPredicted RBP13.32□□□□□ -0.28
PTPRO-209ENST00000543886 SLC25A16P16260 332 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 ADMP35318 185 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 NUDT10Q8NFP7 164 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 NUDT11Q96G61 164 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 C17orf77Q96MU5 243 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
PTPRO-209ENST00000543886 HIF1ANQ9NWT6 349 aa13.32□□□□□ -0.28
PTPRO-209ENST00000543886 SPINK4O60575 86 aa13.31□□□□□ -0.28
PTPRO-209ENST00000543886 SIGLEC15Q6ZMC9 328 aa13.31□□□□□ -0.28
PTPRO-209ENST00000543886 GOLT1AQ6ZVE7 132 aa13.31□□□□□ -0.28
PTPRO-209ENST00000543886 ZNF414Q96IQ9 312 aa13.31□□□□□ -0.28
PTPRO-209ENST00000543886 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 BMPR1BO00238 502 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 SLC35B1P78383 322 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 COX19Q49B96 90 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 WDR73Q6P4I2 378 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 Q86TA4 180 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 EEF1AKMT3Q96AZ1 226 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 MLST8Q9BVC4 326 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
PTPRO-209ENST00000543886 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 IZUMO1RA6ND01 250 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 K7EQM0 130 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 RPL7P18124 248 aaKnown RBP13.3□□□□□ -0.28
PTPRO-209ENST00000543886 PDE6HQ13956 83 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 MBD6Q96DN6 1003 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 MS4A10Q96PG2 267 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 GNB4Q9HAV0 340 aa13.3□□□□□ -0.28
PTPRO-209ENST00000543886 AMY1AP04745 511 aa13.29□□□□□ -0.28
PTPRO-209ENST00000543886 CLEC3BP05452 202 aa13.29□□□□□ -0.28
PTPRO-209ENST00000543886 GATA3P23771 443 aa13.29□□□□□ -0.28
PTPRO-209ENST00000543886 SRSF1Q07955 248 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTPRO-209ENST00000543886 AAMDCQ9H7C9 122 aa13.29□□□□□ -0.28
PTPRO-209ENST00000543886 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
PTPRO-209ENST00000543886 TRAV8-1A0A0A6YYK1 113 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 MT-ND6P03923 174 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 LY6EQ16553 131 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 PRNTQ86SH4 94 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 TRBV7-1A0A0A6YYK4 115 aa13.28□□□□□ -0.28
PTPRO-209ENST00000543886 IGHV3-35A0A0C4DH35 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms