RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 LGALS9CQ6DKI2 356 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 LHFPL1Q86WI0 220 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 USP54Q70EL1 1684 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 CDK5RAP2Q96SN8 1893 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 SIVA1O15304 175 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.56
TRPM1-203ENST00000542188 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
TRPM1-203ENST00000542188 CFPP27918 469 aa11.52□□□□□ -0.57
TRPM1-203ENST00000542188 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
TRPM1-203ENST00000542188 SCN8AQ9UQD0 1980 aa11.52□□□□□ -0.57
TRPM1-203ENST00000542188 J3KT08 172 aa11.52□□□□□ -0.57
TRPM1-203ENST00000542188 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-203ENST00000542188 LY75O60449 1722 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
TRPM1-203ENST00000542188 HGFACQ04756 655 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 C9orf106Q8NAJ2 232 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 RMI2Q96E14 147 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
TRPM1-203ENST00000542188 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 IGLC3P0DOY3 106 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 A0A1W2PR77 199 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 NPSP0C0P6 89 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 MIA3Q5JRA6 1907 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 C18orf32Q8TCD1 76 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
TRPM1-203ENST00000542188 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 B5MCH6 92 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 IGHV1-8P0DP01 117 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 NDPQ00604 133 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 SVIPQ8NHG7 77 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-203ENST00000542188 IGKV1D-8A0A087WSZ0 117 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 F6UB75 175 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
TRPM1-203ENST00000542188 HLA-DRB4P13762 266 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 HLA-DRB4X5D2U9 266 aa11.5□□□□□ -0.57
TRPM1-203ENST00000542188 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 IGHV1-46P01743 117 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 C10orf55Q5SWW7 151 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 NTF4P34130 210 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 ZNF837Q96EG3 531 aaPredicted RBP11.49□□□□□ -0.57
TRPM1-203ENST00000542188 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 H0YJW9 148 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 SCN3AQ9NY46 2000 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 LYL1P12980 280 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 FOXF2Q12947 444 aa11.49□□□□□ -0.57
TRPM1-203ENST00000542188 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 GAS1P54826 345 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 TIAF1O95411 115 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 MP68P56378 58 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 J3QRE1 110 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 M0R1W7 72 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 TFF1P04155 84 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 HERVK_113P63121 156 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 C5orf64Q2M2E5 130 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 MSRB2Q9Y3D2 182 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 IGKV1-5P01602 117 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
TRPM1-203ENST00000542188 ATOX1O00244 68 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 ARID1AO14497 2285 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 PFN1P07737 140 aaKnown RBP11.47□□□□□ -0.57
TRPM1-203ENST00000542188 SCN1AP35498 2009 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
TRPM1-203ENST00000542188 SPATA25Q9BR10 227 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 QSER1Q2KHR3 1735 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 BAALCQ8WXS3 180 aa11.47□□□□□ -0.57
TRPM1-203ENST00000542188 DEFB130BP0DP73 79 aa11.46□□□□□ -0.57
TRPM1-203ENST00000542188 DEFB130AP0DP74 79 aa11.46□□□□□ -0.57
TRPM1-203ENST00000542188 GFI1Q99684 422 aa11.46□□□□□ -0.57
TRPM1-203ENST00000542188 DAZ1Q9NQZ3 744 aaKnown RBP11.46□□□□□ -0.57
TRPM1-203ENST00000542188 TMEM213A2RRL7 107 aa11.46□□□□□ -0.57
TRPM1-203ENST00000542188 NTN3O00634 580 aaPredicted RBP11.46□□□□□ -0.57
TRPM1-203ENST00000542188 BTAF1O14981 1849 aa11.46□□□□□ -0.57
TRPM1-203ENST00000542188 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 SRRM5B3KS81 715 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 H3BMG7 143 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 CFHR2P36980 270 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 IGLV3-32A0A0A0MS00 114 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 CDKN1BP46527 198 aa11.46□□□□□ -0.58
TRPM1-203ENST00000542188 NXPH4O95158 308 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 LHBP01229 141 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 PAPPAQ13219 1627 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 H3BQ85 93 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 NPYP01303 97 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 CRYGSP22914 178 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms