RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FTH1P19P0C7X4 201 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 BVES-AS1Q5T3Y7 98 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 THAP8Q8NA92 274 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 C22orf15Q8WYQ4 148 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 PRSS22Q9GZN4 317 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 A8MWL6 223 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 LTAP01374 205 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 HTR1DP28221 377 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 LINC00574Q9H8X3 128 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGHV2-70DA0A0C4DH43 119 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 TM4SF5O14894 197 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGLV2-11P01706 119 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 TNFRSF1AP19438 455 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 LOXP28300 417 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGFL4Q6B9Z1 124 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 Q86TA4 180 aa8.24□□□□□ -1.09
CDC42SE1-207ENST00000540998 COL6A6A6NMZ7 2263 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGF2RP11717 2491 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 C17orf100A8MU93 164 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 OVOL3O00110 214 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGFL2Q6UWQ7 119 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 RBPMS2Q6ZRY4 209 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 RAB9BQ9NP90 201 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 PPIAL4EA0A075B759 164 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 PPIAL4DF5H284 164 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 PPIAL4FP0DN26 164 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 SLC25A34Q6PIV7 304 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 C5orf17Q8NAS9 161 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 OR8A1Q8NGG7 326 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 C8orf49Q96NF6 230 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 KLF12Q9Y4X4 402 aa8.23□□□□□ -1.09
CDC42SE1-207ENST00000540998 SMKR1H3BMG3 65 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 HILPDAQ9Y5L2 63 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 SERTM2A0A1B0GWG4 89 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 TMEM213A2RRL7 107 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 TMEM178BH3BS89 294 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 LY6HO94772 140 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGHV3-23P01764 117 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 VMA21Q3ZAQ7 101 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 C1orf185Q5T7R7 199 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 PRSS57Q6UWY2 283 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 IGHV3-35A0A0C4DH35 117 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 NDUFB3O43676 98 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 CRIP1P50238 77 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 ARF6P62330 175 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 TMEM133Q9H2Q1 129 aa8.22□□□□□ -1.09
CDC42SE1-207ENST00000540998 PSG9Q00887 426 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 TM4SF20Q53R12 229 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 FAM169BQ8N8A8 192 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 NEU4Q8WWR8 484 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 SCRT2Q9NQ03 307 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 HIGD1AQ9Y241 93 aa8.21□□□□□ -1.09
CDC42SE1-207ENST00000540998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 THBDP07204 575 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGHV1-8P0DP01 117 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 VSTM2AQ8TAG5 236 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 NCOR1P1Q9H4R4 102 aa8.21□□□□□ -1.1
CDC42SE1-207ENST00000540998 CUBNO60494 3623 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 A0A0G2JNJ9 132 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 FMC1Q96HJ9 113 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 MAP1LC3CQ9BXW4 147 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 Q9UFV3 132 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 CRYGCP07315 174 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGLC1P0CG04 106 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 PLGLAQ15195 96 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 LRRC10Q5BKY1 277 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 C2orf91Q6ZV80 131 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 SIGLEC9Q9Y336 463 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 TEX22C9J3V5 150 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 K7EMI3 77 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 CRXO43186 299 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 SAP30O75446 220 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 GAS8-AS1O95177 125 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGKV1-17P01599 117 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 TMEM108Q6UXF1 575 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 C8orf46Q8TAG6 207 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 Q8TAT8 98 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 TMEM186Q96B77 213 aa8.2□□□□□ -1.1
CDC42SE1-207ENST00000540998 MUC6Q6W4X9 2439 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 DLX6P56179 175 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 TRGV9Q99603 122 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 VPS25Q9BRG1 176 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 TTTY13Q9BZ97 58 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms