RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SAA4P35542 130 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 OR8I2Q8N0Y5 310 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 MGST1P10620 155 aaKnown RBP10.82□□□□□ -0.68
RTN3-210ENST00000540798 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
RTN3-210ENST00000540798 VWC2LB2RUY7 222 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 FCGR2BP31994 310 aaPredicted RBP10.81□□□□□ -0.68
RTN3-210ENST00000540798 MFAP4P55083 255 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 PAX8Q06710 450 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 RNF125Q96EQ8 232 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 FMC1Q96HJ9 113 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 IGSF10Q6WRI0 2623 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 TCRAP04437 139 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 IGLC2P0DOY2 106 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 NHLRC2Q8NBF2 726 aa10.81□□□□□ -0.68
RTN3-210ENST00000540798 ASH1LQ9NR48 2969 aaKnown RBP10.81□□□□□ -0.68
RTN3-210ENST00000540798 NPFFO15130 113 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 LTAP01374 205 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 CBLN1P23435 193 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 VPS25Q9BRG1 176 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 SCGB1D1O95968 90 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 CIDEAO60543 219 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 NDUFB8O95169 186 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 TDRG1Q3Y452 100 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 COX19Q49B96 90 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 NUDT10Q8NFP7 164 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 NUDT11Q96G61 164 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 GPR82Q96P67 336 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 HSPB9Q9BQS6 159 aa10.8□□□□□ -0.68
RTN3-210ENST00000540798 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
RTN3-210ENST00000540798 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 UBE2G1P62253 170 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 GBGT1Q8N5D6 347 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 C10orf105Q8TEF2 133 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 FAM168AQ92567 244 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 TXN2Q99757 166 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 C21orf62Q9NYP8 219 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 THYN1Q9P016 225 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 IZUMO1RA6ND01 250 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 GNG7O60262 68 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 IL4P05112 153 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 TMEM136Q6ZRR5 245 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
RTN3-210ENST00000540798 GRAMD2BQ96HH9 432 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 CCL19Q99731 98 aa10.79□□□□□ -0.68
RTN3-210ENST00000540798 NDUFS8O00217 210 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 MT-ND6P03923 174 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 IER3P46695 156 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 WDR73Q6P4I2 378 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 BPIFA4PQ86YQ2 179 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 PIMREGQ9BSJ6 248 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 C20orf202A1L168 122 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 IGLV2-11P01706 119 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 CHRDL1Q9BU40 450 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 H3BTX0 84 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
RTN3-210ENST00000540798 ERASQ7Z444 233 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
RTN3-210ENST00000540798 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 TP53TG3Q9ULZ0 132 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 S4R3C0 116 aa10.78□□□□□ -0.68
RTN3-210ENST00000540798 VPS13CQ709C8 3753 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 ESDP10768 282 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 RASL11AQ6T310 242 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 SIGLEC15Q6ZMC9 328 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 CSMD1Q96PZ7 3565 aa10.77□□□□□ -0.69
RTN3-210ENST00000540798 OR2J3O76001 311 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 CA1P00915 261 aaPredicted RBP10.76□□□□□ -0.69
RTN3-210ENST00000540798 AMY1AP04745 511 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 CTSGP08311 255 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 Q86TA4 180 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 BCL6BQ8N143 479 aaPredicted RBP10.76□□□□□ -0.69
RTN3-210ENST00000540798 OR4F17Q8NGA8 305 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 ALKBH7Q9BT30 221 aaPredicted RBP10.76□□□□□ -0.69
RTN3-210ENST00000540798 SERTAD4Q9NUC0 356 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 TCL1AP56279 114 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 LINC00310P59036 64 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 Q56UQ5 140 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 TSKUQ8WUA8 353 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 ABCA1O95477 2261 aa10.76□□□□□ -0.69
RTN3-210ENST00000540798 WNK2Q9Y3S1 2297 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms