RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 NUP35Q8NFH5 326 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 OR5D16Q8NGK9 328 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 ZNF418Q8TF45 676 aaPredicted RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 SKA2Q8WVK7 121 aaPredicted RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 CHCHD1Q96BP2 118 aaKnown RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 ISOC1Q96CN7 298 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 PLEKHB2Q96CS7 222 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 RMND5BQ96G75 393 aaPredicted RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 TEX37Q96LM6 180 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 EFCAB11Q9BUY7 163 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 TMEM126AQ9H061 195 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 RNF122Q9H9V4 155 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 CACYBPQ9HB71 228 aaKnown RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 C14orf132Q9NPU4 83 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 BATF3Q9NR55 127 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 NAT8BQ9UHF3 227 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 OR52A1Q9UKL2 312 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 KLK9Q9UKQ9 250 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 HS3ST2Q9Y278 367 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 LAMTOR2Q9Y2Q5 125 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 NUBP2Q9Y5Y2 271 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 UHRF1BP1Q6BDS2 1440 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 MED1Q15648 1581 aaPredicted RBP0.61□□□□□ -2.31
MDM2-227ENST00000540709 MYH11P35749 1972 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 KIAA2026Q5HYC2 2103 aa0.61□□□□□ -2.31
MDM2-227ENST00000540709 HEATR5AQ86XA9 2040 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 TRBV6-8A0A0A6YYG3 113 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 TCRBV4S1A1TA0A5B7 111 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C5orf58C9J3I9 102 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C17orf112F2Z3M2 114 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 LYRM1O43325 122 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HCRTO43612 131 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HIST1H2BKO60814 126 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HYPMO75409 117 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 FAM107AO95990 144 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HIST1H2BJP06899 126 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 OR10J4P0C629 311 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 BCL2P10415 239 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 MIFP14174 115 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 S100A11P31949 105 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 SDC2P34741 201 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 RAB5CP51148 216 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HBBP68871 147 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 KLRD1Q13241 179 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 CIRBPQ14011 172 aaKnown RBP0.6□□□□□ -2.31
MDM2-227ENST00000540709 DEFB113Q30KQ7 82 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 FAM74A1Q5RGS3 127 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C2orf82Q6UX34 121 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C4orf22Q6V702 233 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 GKN2Q86XP6 184 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 Q8IYB0 196 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C3orf56Q8N813 242 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 OR5D14Q8NGL3 314 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 C4orf3Q8WVX3 66 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 PYDC1Q8WXC3 89 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 BORCS5Q969J3 196 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 RAB37Q96AX2 223 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 ZC2HC1AQ96GY0 325 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 ODF3Q96PU9 254 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 AIF1LQ9BQI0 150 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 LINC00467Q9BRT7 94 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 TCEAL2Q9H3H9 227 aaPredicted RBP0.6□□□□□ -2.31
MDM2-227ENST00000540709 RASL12Q9NYN1 266 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 TAS2R7Q9NYW3 318 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 TRAPPC2LQ9UL33 140 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 NDUFAF1Q9Y375 327 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 HSPB11Q9Y547 144 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 YTHDC2Q9H6S0 1430 aaKnown RBP0.6□□□□□ -2.31
MDM2-227ENST00000540709 ZNF106Q9H2Y7 1883 aaKnown RBP0.6□□□□□ -2.31
MDM2-227ENST00000540709 CAMSAP1Q5T5Y3 1602 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 PLXND1Q9Y4D7 1925 aa0.6□□□□□ -2.31
MDM2-227ENST00000540709 KIF1BO60333 1816 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 SYNMO15061 1565 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TRAV10A0A0B4J240 114 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TRAV12-1A0A0B4J245 112 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 ARL5CA6NH57 179 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 GABARAPH6UMI1 98 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 KPNA4O00629 521 aaPredicted RBP0.59□□□□□ -2.31
MDM2-227ENST00000540709 DNAL4O96015 105 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 DHFRP00374 187 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 RPL35P42766 123 aaKnown RBP0.59□□□□□ -2.31
MDM2-227ENST00000540709 EIF3IQ13347 325 aaKnown RBP0.59□□□□□ -2.31
MDM2-227ENST00000540709 VMA21Q3ZAQ7 101 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 C10orf55Q5SWW7 151 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TMEM78Q5T7P6 136 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 HRCT1Q6UXD1 115 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 LINC00305Q7Z4B0 112 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TEN1Q86WV5 123 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 LRRC18Q8N456 261 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TEX29Q8N6K0 151 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 FAM216BQ8N7L0 139 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 OR9Q1Q8NGQ5 310 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 OR5H6Q8NGV6 325 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 OR4C6Q8NH72 309 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 ZNF431Q8TF32 576 aaPredicted RBP0.59□□□□□ -2.31
MDM2-227ENST00000540709 LZICQ8WZA0 190 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 POP5Q969H6 163 aaKnown RBP0.59□□□□□ -2.31
MDM2-227ENST00000540709 CARD19Q96LW7 228 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 TP53RKQ96S44 253 aa0.59□□□□□ -2.31
MDM2-227ENST00000540709 LXNQ9BS40 222 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms