RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 LTAP01374 205 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRTN3P24158 256 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR20EP86478 221 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR20CP86479 221 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR20DP86480 221 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR20BP86481 221 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR20AP86496 221 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 TUSC5Q8IXB3 177 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 Q8TCH9 128 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 HSD17B10Q99714 261 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 CHAC1Q9BUX1 264 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 VPREB3Q9UKI3 123 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 PKD1L2Q7Z442 2459 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 IGHG3P01860 377 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 ZNF32P17041 273 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 GNG3P63215 75 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 EIF4EBP1Q13541 118 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 DIAPH2-AS1Q14236 149 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 Q8NA96 180 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 C7orf69Q9H7B7 122 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 POLDIP2Q9Y2S7 368 aa7.64□□□□□ -1.19
CTNNA1-243ENST00000540387 RP1L1Q8IWN7 2480 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 LINC00205P59089 165 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 KRTAP27-1Q3LI81 207 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 NABP2Q9BQ15 211 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 SOX21Q9Y651 276 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 TRAV5A0A0B4J249 113 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 M0QXV9 152 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 PRRG2O14669 202 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 CEND1Q8N111 149 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 ZBTB34Q8NCN2 500 aa7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 AMMECR1Q9Y4X0 333 aaPredicted RBP7.63□□□□□ -1.19
CTNNA1-243ENST00000540387 A0A096LNJ9 63 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 CT45A10P0DMU9 189 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 B4GALT1P15291 398 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 PLP2Q04941 152 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 FAM53AQ6NSI3 398 aaPredicted RBP7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 LINC00596Q86U02 117 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 PPDPFQ9H3Y8 114 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 PRORYQ9H606 182 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 TET2Q6N021 2002 aaPredicted RBP7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 DNPH1O43598 174 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 RBP4P02753 201 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 FAM106CPP0CH98 169 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 HCFC1P51610 2035 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 FAM106AQ4KMX7 169 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 TMEM133Q9H2Q1 129 aa7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-243ENST00000540387 NBEAQ8NFP9 2946 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 ITPR1Q14643 2758 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 TMEM8BA6NDV4 472 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 THBDP07204 575 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 MOGAT3Q86VF5 341 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 PEX7O00628 323 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 SLC25A5P05141 298 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 LOXL1Q08397 574 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 RPRMLQ8N4K4 120 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 KIR2DL4Q99706 377 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 PRRG4Q9BZD6 226 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 PKIBQ9C010 78 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 DYSFO75923 2080 aa7.61□□□□□ -1.19
CTNNA1-243ENST00000540387 TRBV20-1A0A075B6N2 111 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 LINC00473A8K010 186 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 SCGB2A1O75556 95 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 RRN3P1Q2M238 152 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 CFAP126Q5VTH2 177 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 LINC00322Q6ZN03 302 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 ZNF497Q6ZNH5 498 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 RBPMS2Q6ZRY4 209 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 FAM169BQ8N8A8 192 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 ZNF414Q96IQ9 312 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 PRDM14Q9GZV8 571 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 RHODO00212 210 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 SRD5A1P18405 259 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 PRR30Q53SZ7 412 aaPredicted RBP7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 WDR31Q8NA23 367 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 CARD19Q96LW7 228 aa7.6□□□□□ -1.19
CTNNA1-243ENST00000540387 CACNA1BQ00975 2339 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 UBE2L3P68036 154 aaKnown RBP7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 LY6DQ14210 128 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 Q6P435 159 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 OR2H1Q9GZK4 316 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 PRSS22Q9GZN4 317 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 NBASA2RRP1 2371 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 AGRNO00468 2067 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
CTNNA1-243ENST00000540387 C8orf88P0DMB2 117 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms