RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 NXT2Q9NPJ8 142 aaKnown RBP4.91□□□□□ -1.62
SNHG1-211ENST00000539921 DEPPQ9NTK1 212 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 PRNDQ9UKY0 176 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
SNHG1-211ENST00000539921 GTF3C1Q12789 2109 aa4.9□□□□□ -1.62
SNHG1-211ENST00000539921 TRAV12-1A0A0B4J245 112 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF785A8K8V0 405 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 ADM5C9JUS6 153 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 LGALS9O00182 355 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 TIMM23O14925 209 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 SLC25A20O43772 301 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 ACTL6BO94805 426 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 CXCL10P02778 98 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 DEFA4P12838 97 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 CDAP32320 146 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 SEC61GP60059 68 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 UBE2L3P68036 154 aaKnown RBP4.9□□□□□ -1.63
SNHG1-211ENST00000539921 RSPO1Q2MKA7 263 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF329Q86UD4 541 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 DTX2Q86UW9 622 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 AMN1Q8IY45 258 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 Q8IYB0 196 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 SHISA5Q8N114 240 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 POM121L12Q8N7R1 296 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 NABP1Q96AH0 204 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 FLYWCH2Q96CP2 140 aaKnown RBP4.9□□□□□ -1.63
SNHG1-211ENST00000539921 RTL8AQ9BWD3 113 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 PRDM14Q9GZV8 571 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 OBP2BQ9NPH6 170 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 LRRK1Q38SD2 2015 aa4.9□□□□□ -1.63
SNHG1-211ENST00000539921 PHF3Q92576 2039 aaKnown RBP4.89□□□□□ -1.63
SNHG1-211ENST00000539921 H0YIG0 161 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 ATOX1O00244 68 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 CD7P09564 240 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 HOXB4P17483 251 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-211ENST00000539921 CA6P23280 308 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 FCER1GP30273 86 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 LOXL3P58215 753 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 PCBD1P61457 104 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF497Q6ZNH5 498 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 MIR17HGQ75NE6 70 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 TRPT1Q86TN4 253 aaKnown RBP4.89□□□□□ -1.63
SNHG1-211ENST00000539921 C11orf53Q8IXP5 236 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 ZNF441Q8N8Z8 693 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 C1orf159Q96HA4 380 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 FAM167A-AS1Q96KT0 104 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 TMEM74BQ9NUR3 256 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 EPDR1Q9UM22 224 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 SELENOKQ9Y6D0 94 aa4.89□□□□□ -1.63
SNHG1-211ENST00000539921 MUC22E2RYF6 1773 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-211ENST00000539921 CEP350Q5VT06 3117 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 TNRC6BQ9UPQ9 1833 aaKnown RBP4.88□□□□□ -1.63
SNHG1-211ENST00000539921 IGKV2D-26A0A0A0MRZ7 120 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 IGKV3D-11A0A0A0MRZ8 115 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 LINC01549A6NIU2 74 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 INS-IGF2F8WCM5 200 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 J3QLI3 93 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 OVOL3O00110 214 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 TNFRSF6BO95407 300 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 SLC25A16P16260 332 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 PSMB8P28062 276 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 PSMB2P49721 201 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 ERVK-16P61578 105 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 HIST1H4AP62805 103 aaKnown RBP4.88□□□□□ -1.63
SNHG1-211ENST00000539921 C20orf204Q6ZNR8 217 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 SDIM1Q6ZPB5 146 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 FAM90A1Q86YD7 464 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 Q8N1Y9 231 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-211ENST00000539921 CFHR4Q92496 578 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 OCIAD1Q9NX40 245 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 FOXA2Q9Y261 457 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-211ENST00000539921 V9GYY9 64 aa4.88□□□□□ -1.63
SNHG1-211ENST00000539921 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 CCL15-CCL14A0A0B4J2E2 113 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 TRBV10-2A0A0K0K1G8 114 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 TINCRA0A1B0GVN0 87 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 EPM2AB3EWF7 344 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 H3BMM0 161 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 K7EMI3 77 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 TCL1BO95988 128 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 PLAUP00749 431 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 CD3EP07766 207 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 NNATQ16517 81 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 ZC2HC1BQ5TFG8 222 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 NDUFA11Q86Y39 141 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 ITLN1Q8WWA0 313 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 UBE2WQ96B02 151 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 DPH3Q96FX2 82 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 PGLYRP4Q96LB8 373 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 SRSF8Q9BRL6 282 aaKnown RBP4.87□□□□□ -1.63
SNHG1-211ENST00000539921 PRRG4Q9BZD6 226 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 RAXQ9Y2V3 346 aa4.87□□□□□ -1.63
SNHG1-211ENST00000539921 PTPRSQ13332 1948 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms