RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 IFI27L2Q9H2X8 130 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 PCSK5Q92824 1860 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 LOC107984156A0A0G2JMH3 177 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 A0A1B0GX51 115 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 CFIP05156 583 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 PRSS1P07477 247 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 HCFC1P51610 2035 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 GFERP55789 205 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 PRCDQ00LT1 54 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 CD69Q07108 199 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 MORN5Q5VZ52 161 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 Q86TA4 180 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 ARL17AQ8IVW1 177 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 C1orf210Q8IVY1 113 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 OR13H1Q8NG92 308 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 ADAMTS20P59510 1910 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 J3KT08 172 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 CEACAM4O75871 244 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 ZNF157P51786 506 aaPredicted RBP9.92□□□□□ -0.82
USP3-203ENST00000538686 VKORC1L1Q8N0U8 176 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 OR13C6PQ8NH95 151 aa9.92□□□□□ -0.82
USP3-203ENST00000538686 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
USP3-203ENST00000538686 A0A0J9YW62 118 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 LINC00205P59089 165 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 SLC22A18ASQ8N1D0 253 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
USP3-203ENST00000538686 LINC01587Q99440 93 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 SRXN1Q9BYN0 137 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 UNC13CQ8NB66 2214 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 K7EMI3 77 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 PLNP26678 52 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 KIR2DL1P43626 348 aaPredicted RBP9.91□□□□□ -0.82
USP3-203ENST00000538686 UBE2D1P51668 147 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 TRGV9Q99603 122 aa9.91□□□□□ -0.82
USP3-203ENST00000538686 PTPRBP23467 1997 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 DKK1O94907 266 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 ESPL1Q14674 2120 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 FAM173AQ9BQD7 235 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 SPRY4Q9C004 299 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 NGBQ9NPG2 151 aa9.9□□□□□ -0.82
USP3-203ENST00000538686 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.82
USP3-203ENST00000538686 SPTY2D1-AS1A0A0U1RR47 76 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 FSTL3O95633 263 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 C1orf61Q13536 156 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 HES1Q14469 280 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 ALKBH6Q3KRA9 238 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 CHCHD2Q9Y6H1 151 aaPredicted RBP9.89□□□□□ -0.83
USP3-203ENST00000538686 ABCA7Q8IZY2 2146 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 PSPNO60542 156 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 LIFP15018 202 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 OR11H6Q8NGC7 330 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 PRR7Q8TB68 274 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 FOXC2Q99958 501 aa9.89□□□□□ -0.83
USP3-203ENST00000538686 AKIRIN1Q9H9L7 192 aaPredicted RBP9.89□□□□□ -0.83
USP3-203ENST00000538686 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 IGLV3-12A0A075B6K2 115 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 DUSP14O95147 198 aaKnown RBP9.88□□□□□ -0.83
USP3-203ENST00000538686 CKS2P33552 79 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 VEGFBP49765 207 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
USP3-203ENST00000538686 DEFB103AP81534 67 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
USP3-203ENST00000538686 LINC00305Q7Z4B0 112 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
USP3-203ENST00000538686 OTORQ9NRC9 128 aa9.88□□□□□ -0.83
USP3-203ENST00000538686 ZNF785A8K8V0 405 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 C15orf65H3BRN8 121 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 H3BVH4 76 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 PROP1O75360 226 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 CRLF1O75462 422 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 TCL1BO95988 128 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 FAM53AQ6NSI3 398 aaPredicted RBP9.87□□□□□ -0.83
USP3-203ENST00000538686 YAF2Q8IY57 180 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 LINC01600Q96MT4 127 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 IGHV3-43A0A0B4J1X8 118 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 IGHV3-43DP0DP04 118 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 RNASE2P10153 161 aaKnown RBP9.87□□□□□ -0.83
USP3-203ENST00000538686 HOXB4P17483 251 aaPredicted RBP9.87□□□□□ -0.83
USP3-203ENST00000538686 LEPP41159 167 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
USP3-203ENST00000538686 PATE2Q6UY27 113 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 C15orf53Q8NAA6 179 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 Q9H3A6 140 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 TMEM160Q9NX00 188 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 UTRNP46939 3433 aa9.87□□□□□ -0.83
USP3-203ENST00000538686 SLC25A20O43772 301 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 CCL11P51671 97 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 SUB1P53999 127 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP3-203ENST00000538686 ZFP2Q6ZN57 461 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
USP3-203ENST00000538686 DEFB126Q9BYW3 111 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms