RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 LIME1Q9H400 295 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
GGA3-201ENST00000537686 LINC01587Q99440 93 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 NPFFO15130 113 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 TCF21O43680 179 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 LINC01551Q86U37 167 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 SLC25A39Q9BZJ4 359 aaPredicted RBP8.2□□□□□ -1.1
GGA3-201ENST00000537686 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
GGA3-201ENST00000537686 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
GGA3-201ENST00000537686 M0R1W7 72 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 PPP1R17O96001 155 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
GGA3-201ENST00000537686 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
GGA3-201ENST00000537686 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
GGA3-201ENST00000537686 ZNF329Q86UD4 541 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 A0A1B0GW15 77 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 SNAI2O43623 268 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TMEM50AO95807 157 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 SAA4P35542 130 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 EMP1P54849 157 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 SAMD13Q5VXD3 122 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 DUX4L9Q6RFH8 374 aaPredicted RBP8.19□□□□□ -1.1
GGA3-201ENST00000537686 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 PLXNB1O43157 2135 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 GAGE10A6NGK3 116 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 DSCR9P59020 149 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 ST6GALNAC6Q969X2 333 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 NRN1Q9NPD7 142 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 ATP5LO75964 103 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 DKK1O94907 266 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TMEM155Q4W5P6 130 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 DNLZQ5SXM8 178 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 TRGV9Q99603 122 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 SPRY4Q9C004 299 aa8.19□□□□□ -1.1
GGA3-201ENST00000537686 ADMP35318 185 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 ERVK11-1P61568 191 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 LRP4O75096 1905 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 TRAV21A0A0B4J279 112 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 A0A1W2PPI3 338 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 CXCL1P09341 107 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 COX6CP09669 75 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 GZMBP10144 247 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 PET117Q6UWS5 81 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 FOXC2Q99958 501 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 TRGV2A0A075B6R0 118 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 IGKV2-40A0A087WW87 121 aaPredicted RBP8.18□□□□□ -1.1
GGA3-201ENST00000537686 IGKV2D-40P01614 121 aaPredicted RBP8.18□□□□□ -1.1
GGA3-201ENST00000537686 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 GATA4P43694 442 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
GGA3-201ENST00000537686 COLCA2A8K830 154 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 UBE2CO00762 179 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 IGLV1-44P01699 117 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 FABP2P12104 132 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 K7ERU9 68 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 ITGB1BP1O14713 200 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 TCRAP04437 139 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 PAX1P15863 534 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 PSMG4Q5JS54 123 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 XIRP2A4UGR9 3374 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 LYL1P12980 280 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 HTN3P15516 51 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 NDPQ00604 133 aa8.17□□□□□ -1.1
GGA3-201ENST00000537686 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
GGA3-201ENST00000537686 SIGLEC15Q6ZMC9 328 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 RNF138Q8WVD3 245 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
GGA3-201ENST00000537686 LOXP28300 417 aaPredicted RBP8.16□□□□□ -1.1
GGA3-201ENST00000537686 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 Q8TAT8 98 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 PCNX3Q9H6A9 2034 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 ABCA12Q86UK0 2595 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 IGLV3-9A0A075B6K5 115 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 A0A1B0GV90 55 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 K7EM74 188 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 CFHR2P36980 270 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 SPSB3Q6PJ21 355 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 STHQ8IWL8 128 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 ANAPC10Q9UM13 185 aa8.16□□□□□ -1.1
GGA3-201ENST00000537686 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
GGA3-201ENST00000537686 MMP23AO75900 390 aa8.15□□□□□ -1.1
GGA3-201ENST00000537686 ERASQ7Z444 233 aa8.15□□□□□ -1.1
GGA3-201ENST00000537686 JMJD8Q96S16 334 aa8.15□□□□□ -1.1
GGA3-201ENST00000537686 TMEM242Q9NWH2 141 aa8.15□□□□□ -1.1
GGA3-201ENST00000537686 MAPK1IP1LQ8NDC0 245 aa8.15□□□□□ -1.1
GGA3-201ENST00000537686 IGKV1-39P01597 117 aa8.15□□□□□ -1.11
GGA3-201ENST00000537686 IGKV1D-39P04432 117 aa8.15□□□□□ -1.11
GGA3-201ENST00000537686 LINC00614P0C842 121 aa8.15□□□□□ -1.11
GGA3-201ENST00000537686 IGFL4Q6B9Z1 124 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms