RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
CLIP1-209ENST00000537178 AMBPP02760 352 aa8.77□□□□□ -1.01
CLIP1-209ENST00000537178 SRSF7Q16629 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLIP1-209ENST00000537178 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 MYMXA0A1B0GTQ4 84 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 NCR2O95944 276 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 PSG1P11464 419 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 PRB3Q04118 309 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 C1QTNF4Q9BXJ3 329 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 TRANK1O15050 2925 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 TRGV1A0A0A0MS02 117 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 TRAV5A0A0B4J249 113 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 EPOPA6NHQ4 379 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 SRRM5B3KS81 715 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 SAP30O75446 220 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 IGLV3-19P01714 112 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 SRD5A1P18405 259 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 C11orf44Q8N8P7 122 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 LINC00477Q96M19 166 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 IGKV2-40A0A087WW87 121 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 IGKV2D-40P01614 121 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 TCRAP04437 139 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 GUSBP1Q15486 140 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 LYNX1G3V0Z9 82 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 LEPROTO15243 131 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 LYNX1P0DP58 116 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 MINOS1Q5TGZ0 78 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
CLIP1-209ENST00000537178 TRGV9Q99603 122 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 MINOS1-NBL1R4GNA1 71 aa8.76□□□□□ -1.01
CLIP1-209ENST00000537178 IGHV1-46P01743 117 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 LYZL1Q6UWQ5 148 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 C1orf159Q96HA4 380 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 LYZL4Q96KX0 146 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 ESDP10768 282 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 C1orf194Q5T5A4 169 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 WFDC12Q8WWY7 111 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 KLF12Q9Y4X4 402 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
CLIP1-209ENST00000537178 MYO15AQ9UKN7 3530 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 IGHV1-18A0A0C4DH31 117 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 AGMATQ9BSE5 352 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 WFDC1Q9HC57 220 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 LINC00527Q9UJ94 153 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 LY96Q9Y6Y9 160 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 CSRP1P21291 193 aaKnown RBP8.75□□□□□ -1.01
CLIP1-209ENST00000537178 FOXF2Q12947 444 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 ERCC8Q13216 396 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 C10orf55Q5SWW7 151 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 LINC01551Q86U37 167 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 EDA2RQ9HAV5 297 aa8.75□□□□□ -1.01
CLIP1-209ENST00000537178 IGHV2-26A0A0B4J1V2 119 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 LTBRP36941 435 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 NPC2P61916 151 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 RFNGQ9Y644 331 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 PSCAO43653 123 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 RPL15P61313 204 aaKnown RBP8.74□□□□□ -1.01
CLIP1-209ENST00000537178 PAQR4Q8N4S7 273 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-209ENST00000537178 SCRT1Q9BWW7 348 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 VSIRQ9H7M9 311 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 LSM4Q9Y4Z0 139 aaKnown RBP8.74□□□□□ -1.01
CLIP1-209ENST00000537178 A0A1B0GW64 132 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 ZNF672Q499Z4 452 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-209ENST00000537178 PRIMA1Q86XR5 153 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 EXOC3-AS1Q8N2X6 119 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 SPANXA1Q9NS26 97 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 CRIM1Q9NZV1 1036 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 NBASA2RRP1 2371 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 ASCL4Q6XD76 172 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
CLIP1-209ENST00000537178 EFNA4P52798 201 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
CLIP1-209ENST00000537178 COLCA2A8K830 154 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 DLEU1O43261 78 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 CRYGSP22914 178 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 MRPL27Q9P0M9 148 aaKnown RBP8.73□□□□□ -1.01
CLIP1-209ENST00000537178 KIF26BQ2KJY2 2108 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 IGKV1D-8A0A087WSZ0 117 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 TRBV7-1A0A0A6YYK4 115 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 CXCL1P09341 107 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 IGHV1-8P0DP01 117 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 FAM90A2PQ658T7 463 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 ZNF319Q9P2F9 582 aa8.73□□□□□ -1.01
CLIP1-209ENST00000537178 IL18BPO95998 194 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 MAJINQ3KP22 176 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 TPTE2P1Q5T6R2 138 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 CSTL1Q9H114 145 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 PRDM6Q9NQX0 595 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 A6NNC1 897 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 MLNRO43193 412 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 TFF1P04155 84 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 SS18Q15532 418 aa8.72□□□□□ -1.01
CLIP1-209ENST00000537178 LHFPL1Q86WI0 220 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms