RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 USP24Q9UPU5 2620 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 C2orf70A6NJV1 201 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 B9A039 149 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 I3L2K1 104 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 CT83Q5H943 113 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 PRNTQ86SH4 94 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 SPTA1P02549 2419 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 CD3EP07766 207 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 COL8A1P27658 744 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 RBPMS2Q6ZRY4 209 aaKnown RBP10.39□□□□□ -0.75
LGR5-202ENST00000536515 SPATA12Q7Z6I5 190 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 STPG4Q8N801 248 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
LGR5-202ENST00000536515 ITPR1Q14643 2758 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 ANKHD1Q8IWZ3 2542 aaKnown RBP10.38□□□□□ -0.75
LGR5-202ENST00000536515 PAX2Q02962 417 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 ASCL2Q99929 193 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 CNIH1O95406 144 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 IGKV1-17P01599 117 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 LINC01560Q8TB33 94 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 IGFBPL1Q8WX77 278 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 DCHS2Q6V1P9 2916 aa10.38□□□□□ -0.75
LGR5-202ENST00000536515 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 RBPJQ06330 500 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 C17orf77Q96MU5 243 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 SOX21Q9Y651 276 aaPredicted RBP10.37□□□□□ -0.75
LGR5-202ENST00000536515 ARHGAP32A7KAX9 2087 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 TSPOP30536 169 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 GAGE1Q13065 139 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 LDLRAD2Q5SZI1 272 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 FAM120AOSQ5T036 256 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 ONECUT1Q9UBC0 465 aa10.37□□□□□ -0.75
LGR5-202ENST00000536515 CHEK1O14757 476 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 TIMM23O14925 209 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 IGLL1P15814 213 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 LY6DQ14210 128 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 LINC00173Q6ZV60 143 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 IGHV1-24A0A0C4DH33 117 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 NPIPB6E9PJ23 425 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 MUC15Q8N387 334 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 RBM14Q96PK6 669 aaKnown RBP10.36□□□□□ -0.75
LGR5-202ENST00000536515 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 S4R3C0 116 aa10.36□□□□□ -0.75
LGR5-202ENST00000536515 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
LGR5-202ENST00000536515 K7EIM0 57 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
LGR5-202ENST00000536515 ZNF785A8K8V0 405 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 LY6LH3BQJ8 138 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 ZNF138P52744 262 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 ZFP30Q9Y2G7 519 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 HILPDAQ9Y5L2 63 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 NBASA2RRP1 2371 aa10.35□□□□□ -0.75
LGR5-202ENST00000536515 TRBV19A0A075B6N1 114 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 LY6HO94772 140 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 NDUFB8O95169 186 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 KLF17Q5JT82 389 aaPredicted RBP10.34□□□□□ -0.75
LGR5-202ENST00000536515 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 SHANK2-AS3Q9BTD1 123 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 LINC00614P0C842 121 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
LGR5-202ENST00000536515 GRNP28799 593 aaKnown RBP10.34□□□□□ -0.75
LGR5-202ENST00000536515 BPIFA4PQ86YQ2 179 aa10.34□□□□□ -0.75
LGR5-202ENST00000536515 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
LGR5-202ENST00000536515 RELNP78509 3460 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 OR4C46A6NHA9 309 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 FAM90A27PA6NNH2 459 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 APOHP02749 345 aaPredicted RBP10.33□□□□□ -0.76
LGR5-202ENST00000536515 ZNF672Q499Z4 452 aaPredicted RBP10.33□□□□□ -0.76
LGR5-202ENST00000536515 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 TP73-AS1Q9UF72 201 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 H3BRN7 92 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 HAX1O00165 279 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 SIAH2O43255 324 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 IL4P05112 153 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 ARF6P62330 175 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 RNF5Q99942 180 aa10.33□□□□□ -0.76
LGR5-202ENST00000536515 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
LGR5-202ENST00000536515 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
LGR5-202ENST00000536515 C20orf202A1L168 122 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 OVOL3O00110 214 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 CSN3P07498 182 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 SIGLEC15Q6ZMC9 328 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 ZNF491Q8N8L2 437 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 VKORC1Q9BQB6 163 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
LGR5-202ENST00000536515 A0A1W2PRD5 423 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms