RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 TEX46H3BTG2 121 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 CDC34P49427 236 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-205ENST00000535927 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 GUK1Q16774 197 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 KHDC3LQ587J8 217 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 TEX261Q6UWH6 196 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 RPP25LQ8N5L8 163 aaKnown RBP12.31□□□□□ -0.44
VAMP1-205ENST00000535927 DYNLRB2Q8TF09 96 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 GLMPQ8WWB7 406 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 SEPSECSQ9HD40 501 aaKnown RBP12.31□□□□□ -0.44
VAMP1-205ENST00000535927 CLEC5AQ9NY25 188 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 TGP01266 2768 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 ZNF207O43670 478 aaKnown RBP12.3□□□□□ -0.44
VAMP1-205ENST00000535927 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-205ENST00000535927 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
VAMP1-205ENST00000535927 DEFB114Q30KQ6 69 aa12.3□□□□□ -0.44
VAMP1-205ENST00000535927 SAT2Q96F10 170 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-205ENST00000535927 IGHV3OR16-8A0A075B7F1 116 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 TSPAN4O14817 238 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 SAP30O75446 220 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 RAB2AP61019 212 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 LCN12Q6JVE5 192 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
VAMP1-205ENST00000535927 MBD3L1Q8WWY6 194 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
VAMP1-205ENST00000535927 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 ZNF253O75346 499 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 CXorf1O96002 111 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 HBE1P02100 147 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 HIST1H1EP10412 219 aaKnown RBP12.28□□□□□ -0.44
VAMP1-205ENST00000535927 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 FAM122CQ6P4D5 195 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 OR51M1Q9H341 326 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 HRH4Q9H3N8 390 aa12.28□□□□□ -0.44
VAMP1-205ENST00000535927 A0A087X0K7 114 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-205ENST00000535927 PPT1P50897 306 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 PDE6HQ13956 83 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 TCF24Q7RTU0 167 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 FAM167A-AS1Q96KT0 104 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 SPAG8Q99932 426 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-205ENST00000535927 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 MLXQ9UH92 298 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 RFNGQ9Y644 331 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
VAMP1-205ENST00000535927 SORL1Q92673 2214 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 ZNF785A8K8V0 405 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 H2AFB1P0C5Y9 115 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 ATF4P18848 351 aaPredicted RBP12.26□□□□□ -0.45
VAMP1-205ENST00000535927 PMS2P11Q13670 270 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 ZNF767PQ75MW2 155 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 MIR17HGQ75NE6 70 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 PAXXQ9BUH6 204 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 PKD1L1Q8TDX9 2849 aa12.26□□□□□ -0.45
VAMP1-205ENST00000535927 MRPS12O15235 138 aaKnown RBP12.25□□□□□ -0.45
VAMP1-205ENST00000535927 PSMB3P49720 205 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 LCN15Q6UWW0 184 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 ALKAL2Q6UX46 152 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 SUN5Q8TC36 379 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
VAMP1-205ENST00000535927 NKX6-2Q9C056 277 aaPredicted RBP12.25□□□□□ -0.45
VAMP1-205ENST00000535927 IGHV3-49A0A0A0MS15 119 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 MAP1LC3B2A6NCE7 125 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 OR4C46A6NHA9 309 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 OR7C2O60412 319 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 ID1P41134 155 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
VAMP1-205ENST00000535927 PSG9Q00887 426 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-205ENST00000535927 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 SLC50A1Q9BRV3 221 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 MAP1LC3BQ9GZQ8 125 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
VAMP1-205ENST00000535927 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 ZNF705EA8MWA4 302 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-205ENST00000535927 DNASE2O00115 360 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-205ENST00000535927 IGLC2P0DOY2 106 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 GP9P14770 177 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
VAMP1-205ENST00000535927 MORN5Q5VZ52 161 aa12.23□□□□□ -0.45
VAMP1-205ENST00000535927 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms