RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
BDNF-218ENST00000533246 TRAV8-6A0A0B4J262 113 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 C15orf62A8K5M9 175 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 IGKV1-39P01597 117 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 IGKV1D-39P04432 117 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.81
BDNF-218ENST00000533246 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 GPX1P07203 203 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 ZNF418Q8TF45 676 aaPredicted RBP10.01□□□□□ -0.81
BDNF-218ENST00000533246 MGST2Q99735 147 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 MED12LQ86YW9 2145 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 TNRC6AQ8NDV7 1962 aaKnown RBP10.01□□□□□ -0.81
BDNF-218ENST00000533246 C2orf16Q68DN1 1984 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 hDV102S1A0JD36 115 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 WISP2O76076 250 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 WT1P19544 449 aaPredicted RBP10.01□□□□□ -0.81
BDNF-218ENST00000533246 PAX9P55771 341 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 KLRD1Q13241 179 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 Q9H3A6 140 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 NPPCP23582 126 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 ASCL2Q99929 193 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 COL4A3Q01955 1670 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 KIAA1671Q9BY89 1806 aa10.01□□□□□ -0.81
BDNF-218ENST00000533246 IGHV3OR16-12A0A075B7B8 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 IGLC7A0M8Q6 106 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE12JA6NER3 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 NUPR1O60356 82 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE7O76087 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE12FP0CL80 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE12GP0CL81 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE12IP0CL82 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 GAGE4Q13068 117 aa10□□□□□ -0.81
BDNF-218ENST00000533246 PRSS8Q16651 343 aa10□□□□□ -0.81
BDNF-218ENST00000533246 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
BDNF-218ENST00000533246 COA6Q5JTJ3 125 aaKnown RBP10□□□□□ -0.81
BDNF-218ENST00000533246 ZNF502Q8TBZ5 544 aa10□□□□□ -0.81
BDNF-218ENST00000533246 CX3CL1P78423 397 aa10□□□□□ -0.81
BDNF-218ENST00000533246 TRAV8-1A0A0A6YYK1 113 aa10□□□□□ -0.81
BDNF-218ENST00000533246 IGHV2-26A0A0B4J1V2 119 aa10□□□□□ -0.81
BDNF-218ENST00000533246 ADIPOQQ15848 244 aa10□□□□□ -0.81
BDNF-218ENST00000533246 TEX45Q8NA69 505 aa10□□□□□ -0.81
BDNF-218ENST00000533246 IGHG3P01860 377 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 TRGV3P03979 118 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 HBBP68871 147 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 RBPMS2Q6ZRY4 209 aaKnown RBP9.99□□□□□ -0.81
BDNF-218ENST00000533246 Q6ZS92 163 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 RNF183Q96D59 192 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 GPR82Q96P67 336 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 SH2D7A6NKC9 451 aaPredicted RBP9.99□□□□□ -0.81
BDNF-218ENST00000533246 LYL1P12980 280 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 PDLIM4P50479 330 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
BDNF-218ENST00000533246 TMEM30BQ3MIR4 351 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 FAM74A4Q5TZK3 123 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 MYOZ3Q8TDC0 251 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 M0R381 172 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
BDNF-218ENST00000533246 TMEM178BH3BS89 294 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 AREGP15514 252 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 IGLL1P15814 213 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 ATP5IP56385 69 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 FAM90A2PQ658T7 463 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 HAX1O00165 279 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 SFTA2Q6UW10 78 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 TRBV6-6A0A0A6YYG2 114 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 PMS2P5A8MQ11 134 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 WNT2P09544 360 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 OR13C6PQ8NH95 151 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 FGF23Q9GZV9 251 aaPredicted RBP9.98□□□□□ -0.81
BDNF-218ENST00000533246 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 PHLDA3Q9Y5J5 127 aa9.98□□□□□ -0.81
BDNF-218ENST00000533246 NBR2O15453 112 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 COL8A2P25067 703 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 A0A1B0GW64 132 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 ATP5G2Q06055 141 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 TMEM219Q86XT9 240 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 GAFA1Q96PS6 74 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 NHP2Q9NX24 153 aaKnown RBP9.97□□□□□ -0.81
BDNF-218ENST00000533246 EPDR1Q9UM22 224 aa9.97□□□□□ -0.81
BDNF-218ENST00000533246 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms