RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ZNF253O75346 499 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 NMBP08949 121 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 HOXB5P09067 269 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 ZNF846Q147U1 533 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 SPINK9Q5DT21 86 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 PLET1Q6UQ28 207 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 RFKQ969G6 155 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 MSRB1Q9NZV6 116 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 DOK5Q9P104 306 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 IGKV2-40A0A087WW87 121 aaPredicted RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 IGKV2D-40P01614 121 aaPredicted RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 CALRP27797 417 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 RND2P52198 227 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 KIAA0087Q14695 138 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 PACRGLQ8N7B6 248 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 MGST2Q99735 147 aa0.93□□□□□ -2.26
KNL1-211ENST00000533001 CMSS1Q9BQ75 279 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 NOP10Q9NPE3 64 aaKnown RBP0.93□□□□□ -2.26
KNL1-211ENST00000533001 H7C2Y5 167 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 SIVA1O15304 175 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 MPPED1O15442 326 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 TSPAN5P62079 268 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 PSG9Q00887 426 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 CFAP126Q5VTH2 177 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 THOC7Q6I9Y2 204 aaKnown RBP0.92□□□□□ -2.26
KNL1-211ENST00000533001 ZNF493Q6ZR52 646 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 AHSA2Q719I0 299 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 LYZL2Q7Z4W2 148 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 PRSS3P2Q8NHM4 247 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 VSTM2AQ8TAG5 236 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 OR51B2Q9Y5P1 312 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 A0A0A6YYH2 397 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 IGHV3-38A0A0C4DH36 116 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 A6NJ64 397 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 PLA2G10O15496 165 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 FCER2P06734 321 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 NPPCP23582 126 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 HRH1P35367 487 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 BTN1A1Q13410 526 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 OPCMLQ14982 345 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 TAF13Q15543 124 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 JAGN1Q8N5M9 183 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 DUSP18Q8NEJ0 188 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 WFDC1Q9HC57 220 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 TRBV19A0A075B6N1 114 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 TRAV5A0A0B4J249 113 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 FAM231BA6NCW3 169 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 ATP8B1O43520 1251 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 MRPS14O60783 128 aaKnown RBP0.92□□□□□ -2.26
KNL1-211ENST00000533001 CD3DP04234 171 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 IL4P05112 153 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 KCTD21Q4G0X4 260 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 OR10G8Q8NGN5 311 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 OR51H1Q8NH63 302 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 OR10J5Q8NHC4 309 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 DYNC2LI1Q8TCX1 351 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 C20orf144Q9BQM9 153 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 C7orf66A4D0T2 115 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 A6NHS1 94 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 LECT2O14960 151 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 CTDSPLO15194 276 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 PRAF2O60831 178 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 SERPINA3P01011 423 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 CROCCP3Q8IVE0 287 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 NEXN-AS1Q8NBZ9 246 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 RNASEH2CQ8TDP1 164 aaKnown RBP0.92□□□□□ -2.26
KNL1-211ENST00000533001 PLEKHJ1Q9NW61 149 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 ZNF492Q9P255 531 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 ENOPH1Q9UHY7 261 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 WDR83OSQ9Y284 106 aa0.92□□□□□ -2.26
KNL1-211ENST00000533001 TIMM8BQ9Y5J9 83 aaPredicted RBP0.92□□□□□ -2.26
KNL1-211ENST00000533001 IGLV4-60A0A075B6I1 120 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 A0A096LNI7 61 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 A0A0J9YY99 117 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 TMEM189A5PLL7 270 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 PGPEP1LA6NFU8 196 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 GABARAPO95166 117 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 ATP5G1P05496 136 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 OR5AC1P0C628 307 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 NPY1RP25929 384 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 LPAR6P43657 344 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 ATP5G3P48201 142 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 C22orf42Q6IC83 251 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 OR51G1Q8NGK1 321 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 SLC5A7Q9GZV3 580 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 CDKN1BP46527 198 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 MFAP4P55083 255 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 TMEM144Q7Z5S9 345 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 Q8N976 141 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 PRO0255Q9UI72 69 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 VMA21Q3ZAQ7 101 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 C14orf178Q8N769 122 aaPredicted RBP0.91□□□□□ -2.26
KNL1-211ENST00000533001 PRR26Q8N8Z3 221 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 CHCHD3Q9NX63 227 aaKnown RBP0.91□□□□□ -2.26
KNL1-211ENST00000533001 DNASE2O00115 360 aaPredicted RBP0.91□□□□□ -2.26
KNL1-211ENST00000533001 TCRBP04435 133 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 HSMCR30P0CW71 290 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 GNGT1P63211 74 aa0.91□□□□□ -2.26
KNL1-211ENST00000533001 RAB11BQ15907 218 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms