RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TSPAN13O95857 204 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 CKS1BP61024 79 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 CREBBPQ92793 2442 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 LINC00614P0C842 121 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 FHL1Q13642 323 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 IL17RELQ6ZVW7 336 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 PSCAO43653 123 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 A8MXK9 166 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 IGFL4Q6B9Z1 124 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
PCDHA9-202ENST00000532602 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.48
PCDHA9-202ENST00000532602 WT1P19544 449 aaPredicted RBP12.02□□□□□ -0.48
PCDHA9-202ENST00000532602 BEND2Q8NDZ0 799 aa12.02□□□□□ -0.48
PCDHA9-202ENST00000532602 CADP27708 2225 aa12.02□□□□□ -0.48
PCDHA9-202ENST00000532602 FCN3O75636 299 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 Q6ZS49 121 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 TCRAP04437 139 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 ASCL4Q6XD76 172 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 TMEM170AQ8WVE7 144 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 C14orf144Q96I85 54 aa12.02□□□□□ -0.49
PCDHA9-202ENST00000532602 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 J3QLI3 93 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 SERF1AO75920 110 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 TOMM40O96008 361 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 RIPPLY3P57055 190 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 AMBPP02760 352 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 OR5A1Q8NGJ0 315 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 CTAG1AP78358 180 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
PCDHA9-202ENST00000532602 PKDREJQ9NTG1 2253 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 TRAV12-3A0A0B4J271 114 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 IGHV1-69DA0A0B4J2H0 117 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 OVOL3O00110 214 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 IGHV1-69P01742 117 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 A0A1B0GWB2 263 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 CEACAM8P31997 349 aaPredicted RBP12□□□□□ -0.49
PCDHA9-202ENST00000532602 SNAI2O43623 268 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 EVI2AP22794 236 aa12□□□□□ -0.49
PCDHA9-202ENST00000532602 SUPT4H1P63272 117 aaKnown RBP11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 LINC00158P58513 81 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 Q8TCH9 128 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 SLC25A2Q9BXI2 301 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 USF3Q68DE3 2245 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 LCN12Q6JVE5 192 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 LAGE3Q14657 143 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 IFI27L1Q96BM0 104 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 GZMBP10144 247 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 GATA4P43694 442 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 JPT2Q9H910 190 aa11.99□□□□□ -0.49
PCDHA9-202ENST00000532602 FNDC10F2Z333 226 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 TYMSP04818 313 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 TDGF1P3P51864 188 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 MLANAQ16655 118 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 CR1LQ2VPA4 569 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 PHLDA1Q8WV24 401 aaPredicted RBP11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 GRNP28799 593 aaKnown RBP11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 QRFPP83859 136 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 MGST2Q99735 147 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 VCYO14598 125 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 FGF16O43320 207 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 IGKCP01834 107 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 NTF4P34130 210 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 PAX2Q02962 417 aa11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 MCRIP2Q9BUT9 160 aaKnown RBP11.98□□□□□ -0.49
PCDHA9-202ENST00000532602 ADMP35318 185 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 ADAMTS9Q9P2N4 1935 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 C5orf30Q96GV9 206 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 MTURNQ8N3F0 131 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 WNK2Q9Y3S1 2297 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
PCDHA9-202ENST00000532602 C2orf16Q68DN1 1984 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms