RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 C9orf139Q6ZV77 190 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 REC114Q7Z4M0 266 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 OR11H6Q8NGC7 330 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 CEP295Q9C0D2 2601 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 C15orf62A8K5M9 175 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 LOXL1Q08397 574 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-230ENST00000532245 RCHY1Q96PM5 261 aa6.36□□□□□ -1.39
CTNND1-230ENST00000532245 SEPSECSQ9HD40 501 aaKnown RBP6.36□□□□□ -1.39
CTNND1-230ENST00000532245 SPTBN4Q9H254 2564 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 TMEM50AO95807 157 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 GUSBP1Q15486 140 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 MST1LQ2TV78 715 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 NDUFA4L2Q9NRX3 87 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 INSP01308 110 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 KRTAP27-1Q3LI81 207 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 WDR87Q6ZQQ6 2873 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 FREM1Q5H8C1 2179 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 ELOBQ15370 118 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 Q8TAT8 98 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 HSPB8Q9UJY1 196 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 OR10D4PQ8NGN7 298 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 OR9G4Q8NGQ1 327 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 RPP21Q9H633 154 aaKnown RBP6.35□□□□□ -1.39
CTNND1-230ENST00000532245 NRN1Q9NPD7 142 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 TMEM14BQ9NUH8 114 aa6.35□□□□□ -1.39
CTNND1-230ENST00000532245 TMEM250H0YL14 139 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 NIT2Q9NQR4 276 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 A0A1B0GUS0 222 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 ZNF506Q5JVG8 444 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 GEMIN7Q9H840 131 aaKnown RBP6.34□□□□□ -1.39
CTNND1-230ENST00000532245 FBLL1A6NHQ2 334 aaKnown RBP6.34□□□□□ -1.39
CTNND1-230ENST00000532245 HLA-DQA1P01909 254 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 HBBP68871 147 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 CDSNQ15517 529 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 PLCE1Q9P212 2302 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 H3BVH4 76 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 PHOX2AO14813 284 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 CA1P00915 261 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-230ENST00000532245 SCGB1C2P0DMR2 95 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 FOXA3P55318 350 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-230ENST00000532245 SUMO2P61956 95 aaKnown RBP6.34□□□□□ -1.39
CTNND1-230ENST00000532245 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
CTNND1-230ENST00000532245 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.4
CTNND1-230ENST00000532245 IGHV4-31P0DP07 118 aa6.34□□□□□ -1.4
CTNND1-230ENST00000532245 SNRPEP62304 92 aaKnown RBP6.34□□□□□ -1.4
CTNND1-230ENST00000532245 TMEM191AQ9H0A3 160 aa6.34□□□□□ -1.4
CTNND1-230ENST00000532245 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.4
CTNND1-230ENST00000532245 RNASE7Q9H1E1 156 aaKnown RBP6.34□□□□□ -1.4
CTNND1-230ENST00000532245 HIVEP3Q5T1R4 2406 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 M0R3E3 92 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-230ENST00000532245 ZMAT4Q9H898 229 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 A0A1B0GUT8 65 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 MT-ND6P03923 174 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 WT1-ASQ06250 92 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 TLN1Q9Y490 2541 aaKnown RBP6.33□□□□□ -1.4
CTNND1-230ENST00000532245 ZNF138P52744 262 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 TAS2R60P59551 318 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 RFNGQ9Y644 331 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 LINC00862A6NCI5 91 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 CRPP02741 224 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 SRIP30626 198 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 SLURP1P55000 103 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 ZFP30Q9Y2G7 519 aa6.33□□□□□ -1.4
CTNND1-230ENST00000532245 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CXorf65A6NEN9 183 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 NDUFA4O00483 81 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 LY6G6DO95868 133 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CFHR3Q02985 330 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 ERCC8Q13216 396 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 Q8N7P7 452 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 VGLL1Q99990 258 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 PRADC1Q9BSG0 188 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 APOC4P55056 127 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 DEFA6Q01524 100 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTNND1-230ENST00000532245 PSG3Q16557 428 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 SPINK13Q1W4C9 94 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CHD8Q9HCK8 2581 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 ARFGEF3Q5TH69 2177 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 PGPEP1LA6NFU8 196 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CFPP27918 469 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 LMO4P61968 165 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 OR10J3Q5JRS4 329 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 ZNF106Q9H2Y7 1883 aaKnown RBP6.32□□□□□ -1.4
CTNND1-230ENST00000532245 CD5LO43866 347 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
CTNND1-230ENST00000532245 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 RITA1Q96K30 269 aa6.32□□□□□ -1.4
CTNND1-230ENST00000532245 LINC00477Q96M19 166 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms