RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 SNCAP37840 140 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 RAB2AP61019 212 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 C4orf46Q504U0 113 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 NMSQ5H8A3 153 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 BTNL8Q6UX41 500 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 LYZL2Q7Z4W2 148 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 LYG2Q86SG7 212 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 ZNF471Q9BX82 626 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 WFDC10AQ9H1F0 79 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 DAZ1Q9NQZ3 744 aaKnown RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 MRPL36Q9P0J6 103 aaKnown RBP6.3□□□□□ -1.4
SSBP3-212ENST00000528930 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
SSBP3-212ENST00000528930 TRAV25A0A0B4J276 109 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 C9orf170A2RU37 121 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 C15orf62A8K5M9 175 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 CORTO00230 105 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
SSBP3-212ENST00000528930 SCAF4O95104 1147 aaKnown RBP6.29□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM50AO95807 157 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 HOXB5P09067 269 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 RBMY1A1P0DJD3 496 aaKnown RBP6.29□□□□□ -1.4
SSBP3-212ENST00000528930 NPBWR1P48145 328 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
SSBP3-212ENST00000528930 RELQ04864 619 aaPredicted RBP6.29□□□□□ -1.4
SSBP3-212ENST00000528930 RHEBQ15382 184 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 HAGHQ16775 308 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 C2orf83Q53S99 150 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM128Q5BJH2 165 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 LGI3Q8N145 548 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 LILRB2Q8N423 598 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 DEFB125Q8N687 156 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 HIST1H2BAQ96A08 127 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 AQP10Q96PS8 301 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 C20orf24Q9BUV8 137 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 ENY2Q9NPA8 101 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 CYTL1Q9NRR1 136 aa6.29□□□□□ -1.4
SSBP3-212ENST00000528930 IGHV7-4-1A0A0J9YVY3 117 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 OR11H12B2RN74 326 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 GNG7O60262 68 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 PITX3O75364 302 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 CLN5O75503 358 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 NXPH3O95157 252 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 PET100P0DJ07 73 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 SULT1A2P50226 295 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 DHRS2Q13268 280 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 ANKRD55Q3KP44 614 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 FAM74A1Q5RGS3 127 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 TMEM88Q6PEY1 159 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 TOMM20LQ6UXN7 152 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 RBPMS2Q6ZRY4 209 aaKnown RBP6.28□□□□□ -1.4
SSBP3-212ENST00000528930 TMED4Q7Z7H5 227 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 ZNF575Q86XF7 245 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 CBLN2Q8IUK8 224 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 OR52B4Q8NGK2 314 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 OR4X1Q8NH49 305 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 HEYLQ9NQ87 328 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-212ENST00000528930 HSPB7Q9UBY9 170 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 CACFD1Q9UGQ2 172 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 SMPXQ9UHP9 88 aa6.28□□□□□ -1.4
SSBP3-212ENST00000528930 A0A1B0GU03 582 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 DUXBA0A1W2PPF3 345 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 CXorf65A6NEN9 183 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 CEBPZOSA8MTT3 80 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 CHEK1O14757 476 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SFT2D2O95562 160 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 RAB5AP20339 215 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 GPX4P36969 197 aaPredicted RBP6.27□□□□□ -1.41
SSBP3-212ENST00000528930 OPRK1P41145 380 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SRPXP78539 464 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 TNFRSF9Q07011 255 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 PPP1R1AQ13522 171 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 PRSS54Q6PEW0 395 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SLC16A13Q7RTY0 426 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SLC24A4Q8NFF2 622 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 RAB24Q969Q5 203 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 RNF2Q99496 336 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SPAG8Q99932 426 aaPredicted RBP6.27□□□□□ -1.41
SSBP3-212ENST00000528930 C2orf88Q9BSF0 95 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 RHPN1-AS1Q9BWJ2 59 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 ARV1Q9H2C2 271 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 HIPK2Q9H2X6 1198 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 RBKSQ9H477 322 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 SRD5A3Q9H8P0 318 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 TREM1Q9NP99 234 aa6.27□□□□□ -1.41
SSBP3-212ENST00000528930 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
SSBP3-212ENST00000528930 IGHV3OR16-13A0A075B7E8 117 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 A0A087WWC5 75 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 IGHV3-74A0A0B4J1X5 117 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 NUPR2A6NF83 97 aa6.26□□□□□ -1.41
SSBP3-212ENST00000528930 YIF1AO95070 293 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms