RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 APOBEC3DQ96AK3 386 aaPredicted RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 ADAT3Q96EY9 351 aaPredicted RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 CITED1Q99966 193 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 CLEC7AQ9BXN2 247 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 HIGD1BQ9P298 99 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 UFC1Q9Y3C8 167 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 TSSC4Q9Y5U2 329 aaPredicted RBP4.08□□□□□ -1.76
CD44-218ENST00000525469 VWFP04275 2813 aa4.08□□□□□ -1.76
CD44-218ENST00000525469 PCNX3Q9H6A9 2034 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TRAV36DV7A0A075B6V5 113 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 KBTBD11-OT1A0A1B0GTJ5 212 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 hCG_38984A0A1B0GV85 526 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 C17orf51A8MQB3 221 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 FOXI3A8MTJ6 420 aaPredicted RBP4.07□□□□□ -1.76
CD44-218ENST00000525469 H3BMG7 143 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 SYS1-DBNDD2H3BUS1 97 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 SOCS1O15524 211 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 NUPR1O60356 82 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 DHRS3O75911 302 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 CST7O76096 145 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 UTS2O95399 124 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 CBLN1P23435 193 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PTGDSP41222 190 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 IER3P46695 156 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 CSN1S1P47710 185 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 FUT6P51993 359 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TAS2R45P59539 299 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 HILS1P60008 231 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 GNG3P63215 75 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 BSPH1Q075Z2 132 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 FUT7Q11130 342 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PMVKQ15126 192 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 MRPL23Q16540 153 aaKnown RBP4.07□□□□□ -1.76
CD44-218ENST00000525469 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PHLDA2Q53GA4 152 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 Q56UQ5 140 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.07□□□□□ -1.76
CD44-218ENST00000525469 ZNF721Q8TF20 911 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 CACNG8Q8WXS5 425 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TMEM54Q969K7 222 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TMEM45BQ96B21 275 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PRRG4Q9BZD6 226 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PNRC2Q9NPJ4 139 aaKnown RBP4.07□□□□□ -1.76
CD44-218ENST00000525469 TMEM167BQ9NRX6 74 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 TNFRSF19Q9NS68 423 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PSENENQ9NZ42 101 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 ZNF581Q9P0T4 197 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 PPIAL4AQ9Y536 164 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 KCNE3Q9Y6H6 103 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 HLA-DRB4X5D2U9 266 aa4.07□□□□□ -1.76
CD44-218ENST00000525469 LOC102724200A0A096LPH7 203 aaPredicted RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 IGLV1-36A0A0B4J1U3 117 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 IGHV1-24A0A0C4DH33 117 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 PRSS29PA6NIE9 313 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 C2orf70A6NJV1 201 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 SH2D7A6NKC9 451 aaPredicted RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 PRR32B1ATL7 298 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 H3BUT2 72 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 BMPR1BO00238 502 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 SH2D1BO14796 132 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 PAGE4O60829 102 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 FCN3O75636 299 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 CNIH1O95406 144 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 CA1P00915 261 aaPredicted RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 BGLAPP02818 100 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 FCGR2AP12318 317 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 NTF3P20783 257 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 SRIP30626 198 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 OR3A4PP47883 348 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 FBXW4P57775 412 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 RPL18Q07020 188 aaKnown RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 SLC38A11Q08AI6 406 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 PSG7Q13046 419 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 TTC32Q5I0X7 151 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 ASPHD2Q6ICH7 369 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 ADAMTSL5Q6ZMM2 481 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 RBPMS2Q6ZRY4 209 aaKnown RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 FAM231DQ6ZW35 169 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 TPRX1Q8N7U7 411 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 WDR31Q8NA23 367 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 OR2M3Q8NG83 312 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 MRPL32Q9BYC8 188 aaKnown RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 PBOV1Q9GZY1 135 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 TMEM133Q9H2Q1 129 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 IFI27L2Q9H2X8 130 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 FNDC4Q9H6D8 234 aaPredicted RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 HES4Q9HCC6 221 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 KLRF1Q9NZS2 232 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 THYN1Q9P016 225 aa4.06□□□□□ -1.76
CD44-218ENST00000525469 PRKDCP78527 4128 aaKnown RBP4.06□□□□□ -1.76
CD44-218ENST00000525469 IGHV4-61A0A0C4DH41 118 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 SMIM27A0A1W2PRY6 76 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 FABP5P3A8MUU1 101 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 VWC2LB2RUY7 222 aa4.05□□□□□ -1.76
CD44-218ENST00000525469 M0QXV9 152 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms