RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LGI3Q8N145 548 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 OR52E5Q8NH55 327 aa7.97□□□□□ -1.13
SDCBP-211ENST00000523441 PARD6GQ9BYG4 376 aaPredicted RBP7.97□□□□□ -1.13
SDCBP-211ENST00000523441 A8MTW9 85 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 RLN2P04090 185 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 CD3DP04234 171 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 FABP1P07148 127 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 ORM2P19652 201 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 GATA2P23769 480 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-211ENST00000523441 NMSQ5H8A3 153 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 NOXA1Q86UR1 476 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 OR4D10Q8NGI6 311 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 ZFAND1Q8TCF1 268 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 TMPRSS5Q9H3S3 457 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 RBKSQ9H477 322 aa7.96□□□□□ -1.14
SDCBP-211ENST00000523441 TRAV8-2A0A0B4J237 113 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 ZNF98A6NK75 572 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 ADAP1O75689 374 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 NXPH4O95158 308 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 KIR3DS1Q14943 382 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 SAMD13Q5VXD3 122 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 TMED4Q7Z7H5 227 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 LHFPL1Q86WI0 220 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 FAM219AQ8IW50 185 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 OR1B1Q8NGR6 318 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 DTD1Q8TEA8 209 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
SDCBP-211ENST00000523441 RBPMSQ93062 196 aaKnown RBP7.95□□□□□ -1.14
SDCBP-211ENST00000523441 ZNF503Q96F45 646 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM222Q9H0R3 208 aa7.95□□□□□ -1.14
SDCBP-211ENST00000523441 SNURFLB1AK76 121 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 FAM25AB3EWG3 89 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 FAM25CB3EWG5 89 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 FAM25GB3EWG6 89 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 HPGDSO60760 199 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 CDS2O95674 445 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 SNRPCP09234 159 aaKnown RBP7.94□□□□□ -1.14
SDCBP-211ENST00000523441 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 FAAP20Q6NZ36 180 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 CROCCP3Q8IVE0 287 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM256Q8N2U0 113 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 LRRC20Q8TCA0 184 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 RNASE8Q8TDE3 154 aaKnown RBP7.94□□□□□ -1.14
SDCBP-211ENST00000523441 GLYATL2Q8WU03 294 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 VCX3BQ9H321 246 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 NAA60Q9H7X0 242 aa7.94□□□□□ -1.14
SDCBP-211ENST00000523441 C14orf166Q9Y224 244 aaKnown RBP7.94□□□□□ -1.14
SDCBP-211ENST00000523441 IAPPP10997 89 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 ZNF493Q6ZR52 646 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 Q6ZTI0 123 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 CCDC190Q86UF4 302 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 OR8A1Q8NGG7 326 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 U3KQ87 197 aa7.93□□□□□ -1.14
SDCBP-211ENST00000523441 IGLV5-52A0A0A0MRZ9 124 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM182Q6ZP80 229 aaPredicted RBP7.92□□□□□ -1.14
SDCBP-211ENST00000523441 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 TERB2Q8NHR7 220 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 VSIG2Q96IQ7 327 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM147Q9BVK8 224 aa7.92□□□□□ -1.14
SDCBP-211ENST00000523441 TRGV2A0A075B6R0 118 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 IGKV1OR2-108A0A075B7D4 117 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 H7BYZ3 331 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 LCE2BO14633 110 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 RAB3DO95716 219 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 GPX4P36969 197 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-211ENST00000523441 CDKN1BP46527 198 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 OR1S1Q8NH92 325 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 TRGV9Q99603 122 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 RTBDNQ9BSG5 229 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-211ENST00000523441 RAB26Q9ULW5 256 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
SDCBP-211ENST00000523441 TMEM127O75204 238 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 APOA1P02647 267 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 PSG3Q16557 428 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 GGNBP1Q5YKI7 109 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.14
SDCBP-211ENST00000523441 RPUSD4Q96CM3 377 aaKnown RBP7.9□□□□□ -1.14
SDCBP-211ENST00000523441 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.15
SDCBP-211ENST00000523441 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 SMCO3A2RU48 225 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 H3BTX0 84 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 B3GALNT1O75752 331 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 OR5G3P0C626 314 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 RAB11AP62491 216 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 AKR1C1Q04828 323 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 SMCO1Q147U7 214 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 GFI1BQ5VTD9 330 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 LYZL2Q7Z4W2 148 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 LINC00612Q8N6U2 182 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 IL22RA2Q969J5 263 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 HSPB7Q9UBY9 170 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms