RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 CDK12Q9NYV4 1490 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 ADGRB1O14514 1584 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 DIP2CQ9Y2E4 1556 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TET3O43151 1660 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 C5P01031 1676 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ZNF142P52746 1687 aaPredicted RBP0.4□□□□□ -2.35
CLK4-213ENST00000523013 SCN7AQ01118 1682 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 ALS2Q96Q42 1657 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 LAMB1P07942 1786 aa0.4□□□□□ -2.35
CLK4-213ENST00000523013 TNRC6AQ8NDV7 1962 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 EXPH5Q8NEV8 1989 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 OVOS2A0A0G2JMS6 1433 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 OVOS2A0A0J9YW53 1432 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 KDM6AO15550 1401 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 CPSF1Q10570 1443 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 OVOS2Q6IE36 1432 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 PPIP5K1Q6PFW1 1433 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 CD109Q6YHK3 1445 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 YTHDC2Q9H6S0 1430 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 DLC1Q96QB1 1528 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TULP4Q9NRJ4 1543 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TMEM131LA2VDJ0 1609 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 PIK3C2BO00750 1634 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 DDX60Q8IY21 1712 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 XRN1Q8IZH2 1706 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 PEAK1Q9H792 1746 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MYH7BA7E2Y1 1941 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TRBV19A0A075B6N1 114 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 IGKV1-9A0A0C4DH69 117 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 A0A0D9SG52 128 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TRAPPC13A5PLN9 417 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MEIS3P1A6NDR6 274 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 CLDN25C9JDP6 229 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 E5RI56 91 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 H3BQV1 296 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 M0R378 163 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 CIAO1O76071 339 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 IFNA1P01562 189 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 PPBPP02775 128 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SHBGP04278 402 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 CTSDP07339 412 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 SMIM17P0DL12 118 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 NFYAP23511 347 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 CASP1P29466 404 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ERP29P30040 261 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 SERPINB1P30740 379 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 RNASE4P34096 147 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 PHBP35232 272 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ATP5G3P48201 142 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 EIF2B2P49770 351 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 EMP1P54849 157 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 AQP4P55087 323 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ARPP19P56211 112 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 DEFA3P59666 94 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 GNG11P61952 73 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 GNG5P63218 68 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ERHP84090 104 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 RPL19P84098 196 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 RELAQ04206 551 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SLC38A11Q08AI6 406 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 RRN3P1Q2M238 152 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TMEM155Q4W5P6 130 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SPANXN3Q5MJ09 141 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 IZUMO2Q6UXV1 221 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MIR17HGQ75NE6 70 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ARPINQ7Z6K5 226 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 LRRC28Q86X40 367 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 BPIFA4PQ86YQ2 179 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SMIM20Q8N5G0 67 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ZNF439Q8NDP4 499 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 OR8D4Q8NGM9 314 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SLAMF6Q96DU3 332 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 PHB2Q99623 299 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 HOPXQ9BPY8 73 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 IMUPQ9GZP8 106 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MRPL40Q9NQ50 206 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 BATF3Q9NR55 127 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 OSTCQ9NRP0 149 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SLC39A9Q9NUM3 307 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 GID8Q9NWU2 228 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SMPXQ9UHP9 88 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ATPIF1Q9UII2 106 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 STOML2Q9UJZ1 356 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ERGIC3Q9Y282 383 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 UFC1Q9Y3C8 167 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 RFX7Q2KHR2 1363 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 A2ML1A8K2U0 1454 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MLH3Q9UHC1 1453 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ERCC6L2Q5T890 1561 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 SETBP1Q9Y6X0 1596 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 TOPAZ1Q8N9V7 1692 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 RREB1Q92766 1687 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 A0A1B0GUL6 1792 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 LAMB4A4D0S4 1761 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 RGPD8O14715 1765 aaPredicted RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 RGPD5Q99666 1765 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 MYO5AQ9Y4I1 1855 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 ZFC3H1O60293 1989 aaKnown RBP0.39□□□□□ -2.35
CLK4-213ENST00000523013 KIAA1549Q9HCM3 1950 aa0.39□□□□□ -2.35
CLK4-213ENST00000523013 ZDBF2Q9HCK1 2354 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms