RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 A8MWP6 167 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 H7C2Y5 167 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 L7N2F9 121 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 UPK2O00526 184 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 ARPC5O15511 151 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 SYNGR2O43760 224 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 TSC22D2O75157 780 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 TMEM50AO95807 157 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 KRASP01116 189 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 C8orf88P0DMB2 117 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 PVALBP20472 110 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 G6PCP35575 357 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 SPCS3P61009 180 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 UBE2KP61086 200 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 HSPE1P61604 102 aaKnown RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 BAXQ07812 192 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 TEX261Q6UWH6 196 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 UNQ9165/PRO28630Q6UXU0 137 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 C19orf35Q6ZS72 473 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 ZNF767PQ75MW2 155 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 H2BFWTQ7Z2G1 175 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 TEX45Q8NA69 505 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 Q8NAQ8 132 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 VSTM2AQ8TAG5 236 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 STOML3Q8TAV4 291 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 CIB3Q96Q77 187 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 SLC25A31Q9H0C2 315 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 ARV1Q9H2C2 271 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 CYTL1Q9NRR1 136 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 SLC35D1Q9NTN3 355 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 LYRM2Q9NU23 88 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 TMEM14BQ9NUH8 114 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 CACNG5Q9UF02 275 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 RCL1Q9Y2P8 373 aaKnown RBP4.75□□□□□ -1.65
SDCBP-210ENST00000522843 U3KQ87 197 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 NACAE9PAV3 2078 aa4.75□□□□□ -1.65
SDCBP-210ENST00000522843 FXYD6-FXYD2A0A087WZ82 144 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 TRAV25A0A0B4J276 109 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 EPM2AB3EWF7 344 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 BCL2L11O43521 198 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 GGCTO75223 188 aaKnown RBP4.74□□□□□ -1.65
SDCBP-210ENST00000522843 KBTBD11O94819 623 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 CRYZL1O95825 349 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 IGHV3-23P01764 117 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 APOA2P02652 100 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 AMBPP02760 352 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 OR9G9P0C7N8 305 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 P0DMU3 169 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 FAM231AP0DMU4 169 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 FAM231CP0DMU5 169 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 RPL12P30050 165 aaKnown RBP4.74□□□□□ -1.65
SDCBP-210ENST00000522843 MAS1LP35410 378 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 AKR1C2P52895 323 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 ERVK-16P61578 105 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 POLR2GP62487 172 aaKnown RBP eCLIP4.74□□□□□ -1.65
SDCBP-210ENST00000522843 ATP5G2Q06055 141 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 OR4A47Q6IF82 309 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 TMEM14EPQ6UXP3 125 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 APRG1Q8IVJ8 170 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 TMEM252Q8N6L7 170 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 UBAC2Q8NBM4 344 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 ZNF680Q8NEM1 530 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 OR5B3Q8NH48 314 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 TMEM167AQ8TBQ9 72 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 PHYHIPLQ96FC7 376 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 CHRDL1Q9BU40 450 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 ARL6Q9H0F7 186 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 CSTL1Q9H114 145 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 MSRB1Q9NZV6 116 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 PRNDQ9UKY0 176 aa4.74□□□□□ -1.65
SDCBP-210ENST00000522843 TRAV10A0A0B4J240 114 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 KANTRA0A1W2PQU2 76 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 FAM223BA6NKX1 122 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 C15orf61A6NNL5 157 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 PMS2P5A8MQ11 134 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 OR2J3O76001 311 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 IFNA7P01567 189 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 EIF5AP63241 154 aaKnown RBP4.73□□□□□ -1.65
SDCBP-210ENST00000522843 ATP6V1FQ16864 119 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 LRRC37A5PQ49AS3 106 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 C1orf134Q5TEV5 83 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 FAM223AQ8IWN6 122 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 OR4A16Q8NH70 328 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 TSNAXQ99598 290 aaKnown RBP4.73□□□□□ -1.65
SDCBP-210ENST00000522843 SPAG8Q99932 426 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-210ENST00000522843 SRSF8Q9BRL6 282 aaKnown RBP4.73□□□□□ -1.65
SDCBP-210ENST00000522843 GGACTQ9BVM4 153 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 PARD6GQ9BYG4 376 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-210ENST00000522843 NDUFA4L2Q9NRX3 87 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 S4R3C0 116 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
SDCBP-210ENST00000522843 TRAV3A0A0B4J244 114 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 IGHV4-28A0A0C4DH34 117 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 TEX50A0A1B0GTY4 177 aa4.72□□□□□ -1.65
SDCBP-210ENST00000522843 ZNF320A2RRD8 509 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms