RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SMIM6P0DI80 62 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 PET100P0DJ07 73 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 TPT1P13693 172 aaKnown RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 GTF2F2P13984 249 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 FOLR2P14207 255 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 HIST1H1CP16403 213 aaKnown RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 PVALBP20472 110 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ARHGDIBP52566 201 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 H2BFSP57053 126 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 RAB5BP61020 215 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 MADCAM1Q13477 382 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 RNF212Q495C1 297 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF876PQ49A33 203 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 CDNFQ49AH0 187 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ACTBL2Q562R1 376 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 TEX30Q5JUR7 227 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 HES5Q5TA89 166 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 LINC01590Q5TEZ4 76 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 Q6P435 159 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 LRRTM1Q86UE6 522 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 SLC25A42Q86VD7 318 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ANGPTL5Q86XS5 388 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 NPBQ8NG41 125 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 OR8B12Q8NGG6 310 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 OR4C16Q8NGL9 310 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 OR10K1Q8NGX5 313 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 RNF133Q8WVZ7 376 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 SPTSSAQ969W0 71 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 NARS2Q96I59 477 aaKnown RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 TSNAXQ99598 290 aaKnown RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 PHB2Q99623 299 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 ATP5SQ99766 215 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 PDCD1LG2Q9BQ51 273 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 SEC11CQ9BY50 192 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 NMES1Q9C002 83 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 FXYD6Q9H0Q3 95 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 OR51M1Q9H341 326 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 PARP11Q9NR21 331 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 SHPKQ9UHJ6 478 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 TNFSF18Q9UNG2 199 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 FLVCR2Q9UPI3 526 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 POLR1DQ9Y2S0 133 aa2.62□□□□□ -1.99
VPS13B-208ENST00000521037 CARHSP1Q9Y2V2 147 aaKnown RBP2.62□□□□□ -1.99
VPS13B-208ENST00000521037 IGHV3-16A0A0C4DH30 117 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 IGKV1-12A0A0C4DH73 117 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ODAMA1E959 279 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 TMEM213A2RRL7 107 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 A6NIN4 97 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR4C45A6NMZ5 311 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF705EA8MWA4 302 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-208ENST00000521037 E9PLD3 99 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 C15orf65H3BRN8 121 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 HAND1O96004 215 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 RENP00797 406 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 IGKV1D-12P01611 117 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 RLN2P04090 185 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ISG15P05161 165 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 C8orf88P0DMB2 117 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ALOX5APP20292 161 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 PSMB6P28072 239 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 CRABP1P29762 137 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 HAAOP46952 286 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 TFPI2P48307 235 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 MEOX2P50222 304 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 AESQ08117 197 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 DHRS2Q13268 280 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ARL6IP1Q15041 203 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 USF2Q15853 346 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-208ENST00000521037 C5orf64Q2M2E5 130 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 SLC22A6Q4U2R8 563 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 AKIRIN2Q53H80 203 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 SOHLH1Q5JUK2 328 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 UFSP1Q6NVU6 142 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 SSX6Q7RTT6 188 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 LINC00596Q86U02 117 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 BAP18Q8IXM2 172 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ARRDC1Q8N5I2 433 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 LINC00311Q8N616 119 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR51S1Q8NGJ8 323 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR6K6Q8NGW6 343 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR2G2Q8NGZ5 317 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR11H2Q8NH07 326 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OR4K13Q8NH42 304 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 OTOSQ8NHW6 89 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 FAM3DQ96BQ1 224 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 CYYR1Q96J86 154 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 C12orf57Q99622 126 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 RARRES2Q99969 163 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 RASL11BQ9BPW5 248 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 FAM103A1Q9BTL3 118 aaKnown RBP2.61□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF471Q9BX82 626 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-208ENST00000521037 SMDT1Q9H4I9 107 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 SMCO4Q9NRQ5 59 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 RAB22AQ9UL26 194 aa2.61□□□□□ -1.99
VPS13B-208ENST00000521037 A0A087X002 238 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TRAV14DV4A0A0A6YYC5 116 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 TRAV39A0A0B4J263 110 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 PIGBOS1A0A0B4J2F0 54 aa2.6□□□□□ -1.99
VPS13B-208ENST00000521037 ZNF729A6NN14 1252 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms