RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TAS2R20P59543 309 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 GABARAPL2P60520 117 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 TIGITQ495A1 244 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 TMEM69Q5SWH9 247 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 SLC35G3Q8N808 338 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 DCANP1Q8TF63 244 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 MRGPRFQ96AM1 343 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 NARS2Q96I59 477 aaKnown RBP4.11□□□□□ -1.75
PABPC1-216ENST00000520868 VCX3BQ9H321 246 aa4.11□□□□□ -1.75
PABPC1-216ENST00000520868 FNDC4Q9H6D8 234 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-216ENST00000520868 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 HELTA6NFD8 242 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 IGKV1-5P01602 117 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 SPART-AS1P0CW21 52 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 RNASE2P10153 161 aaKnown RBP4.1□□□□□ -1.75
PABPC1-216ENST00000520868 HTN3P15516 51 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 PRSS3P35030 304 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 TGFBR1P36897 503 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 OPRK1P41145 380 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 SUB1P53999 127 aaKnown RBP eCLIP4.1□□□□□ -1.75
PABPC1-216ENST00000520868 PAX9P55771 341 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 FXYD7P58549 80 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 NUTF2P61970 127 aaKnown RBP4.1□□□□□ -1.75
PABPC1-216ENST00000520868 SOHLH1Q5JUK2 328 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 LPCAT3Q6P1A2 487 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 SAMD12Q8N8I0 201 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 OR4X1Q8NH49 305 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 FCGR1BQ92637 280 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 PDCD10Q9BUL8 212 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 ENY2Q9NPA8 101 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 RPS10P5Q9NQ39 176 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 FAM212BQ9NTI7 297 aaPredicted RBP4.1□□□□□ -1.75
PABPC1-216ENST00000520868 RAB26Q9ULW5 256 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 ANAPC10Q9UM13 185 aa4.1□□□□□ -1.75
PABPC1-216ENST00000520868 H3BMM0 161 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 CORTO00230 105 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 SCGB2A1O75556 95 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 IGKV1-17P01599 117 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 CD74P04233 296 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 PGAM2P15259 253 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 EIF2B2P49770 351 aaKnown RBP4.09□□□□□ -1.75
PABPC1-216ENST00000520868 AKR1C2P52895 323 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 AP2S1P53680 142 aaPredicted RBP4.09□□□□□ -1.75
PABPC1-216ENST00000520868 DEFB1P60022 68 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 DHODHQ02127 395 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 NEDD8Q15843 81 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 UBE2NLQ5JXB2 153 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 C1orf134Q5TEV5 83 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 C16orf54Q6UWD8 224 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 Q6ZR54 194 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 Q8WTZ3 238 aa4.09□□□□□ -1.75
PABPC1-216ENST00000520868 FAT1Q14517 4588 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 TRAV30A0A087WSZ9 112 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 A0A0G2JRQ6 117 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 INS-IGF2F8WCM5 200 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 RPL5P46777 297 aaKnown RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 RND2P52198 227 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 LSM3P62310 102 aaKnown RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 CYCSP99999 105 aaKnown RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 RIGQ13278 110 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 SP6Q3SY56 376 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 KCTD21Q4G0X4 260 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 FAM222AQ5U5X8 452 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 SIGLEC15Q6ZMC9 328 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 ZNF705AQ6ZN79 300 aaPredicted RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 SNX29P2Q8IUI4 249 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 RNASE11Q8TAA1 199 aaKnown RBP4.08□□□□□ -1.76
PABPC1-216ENST00000520868 GPX8Q8TED1 209 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 TP53RKQ96S44 253 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 NIPSNAP3BQ9BS92 247 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 COMMD3Q9UBI1 195 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 RFNGQ9Y644 331 aa4.08□□□□□ -1.76
PABPC1-216ENST00000520868 C3orf85A0A1B0GTC6 90 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 SMIM31A0A1B0GVY4 71 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 TMEM189A5PLL7 270 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 SMIM9A6NGZ8 99 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 ZNF705FA8MVS1 300 aaPredicted RBP4.07□□□□□ -1.76
PABPC1-216ENST00000520868 C16orf90A8MZG2 172 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 CDK2AP2O75956 126 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 ATG12O94817 140 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 IL4P05112 153 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 P0C879 139 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 IGLC1P0CG04 106 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 ZNF705DP0CH99 300 aaPredicted RBP4.07□□□□□ -1.76
PABPC1-216ENST00000520868 ZNF705BP0CI00 300 aaPredicted RBP4.07□□□□□ -1.76
PABPC1-216ENST00000520868 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 OR10J1P30954 320 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 RCVRNP35243 200 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 PIGPP57054 158 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 RND3P61587 244 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 USF2Q15853 346 aaPredicted RBP4.07□□□□□ -1.76
PABPC1-216ENST00000520868 TRIM16LQ309B1 348 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 RNF212Q495C1 297 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 PRSS54Q6PEW0 395 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 CROCCP3Q8IVE0 287 aa4.07□□□□□ -1.76
PABPC1-216ENST00000520868 OR4B1Q8NGF8 309 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms